Transcript Information: R_Transcript_56403.p1


Annotated TAIR IDAT3G46020.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:16912511-16913250 | Reverse length=102
E-Value3E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.6310574349144
Replicate 21.7024027364566
Replicate 33.0955050805611
Condition 2: 8 Hour
Replicate 13.7500874243529
Replicate 24.6333358770024
Replicate 33.7611445429631
Condition 3: 24 Hour
Replicate 14.5501960271125
Replicate 25.3647927031134
Replicate 36.9015285048775


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56403.p1 GENE.R_Transcript_56403~~R_Transcript_56403.p1 ORF type:5prime_partial len:111 (+),score=17.41,RRM_1|PF00076.18|1.8e-22,RRM_1|PF00076.18|1.7e+02,RRM_6|PF14259.2|3.3e-15,RRM_6|PF14259.2|1.6e+03,RRM_5|PF13893.2|4.8e-13 R_Transcript_56403:2-334(+)
TCAACCTTCCGGTGCTTAACTACTTCCAACCCTCTGTACTCAGCTGTCAGATTCAGCTCCGAGCTCTTTGTTAGTAGACTTTCATTTTACACTACAAGTGAGGAATTAAAGGGCATGTTTTCCCTATTTGGGGATGTCAAAGAAGTAAGGCTGATAACGGATCCCAGAACAGGAAGGCCAAAAGGGTTTGGTTTTGTAAAGTTTGAGACTGAGGTTGAGGCTCAAAATGCTGCAAAGGCTTTAAATGGCAGGATAGTCCAAGGACGAATAATTTTTGTGGAGTTCGCAAATCACAGAAAGACGGAGGGAGAAGATACTACCCCTCAATATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56403.p1 GENE.R_Transcript_56403~~R_Transcript_56403.p1 ORF type:5prime_partial len:111 (+),score=17.41,RRM_1|PF00076.18|1.8e-22,RRM_1|PF00076.18|1.7e+02,RRM_6|PF14259.2|3.3e-15,RRM_6|PF14259.2|1.6e+03,RRM_5|PF13893.2|4.8e-13 R_Transcript_56403:2-334(+)
STFRCLTTSNPLYSAVRFSSELFVSRLSFYTTSEELKGMFSLFGDVKEVRLITDPRTGRPKGFGFVKFETEVEAQNAAKALNGRIVQGRIIFVEFANHRKTEGEDTTPQY*

Click here to download the sequence:
Link to NCBI Protein BLAST