Transcript Information: R_Transcript_56418.p2


Annotated TAIR IDAT5G24165.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23885.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:8188622-8189087 | Forward length=75
E-Value5.6E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 187.13615884336
Replicate 280.735774219813
Replicate 395.444739983969
Condition 2: 8 Hour
Replicate 183.368540177525
Replicate 293.70274295354
Replicate 388.381056473075
Condition 3: 24 Hour
Replicate 1111.78265662061
Replicate 281.394407810464
Replicate 394.846720309888


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56418.p2 GENE.R_Transcript_56418~~R_Transcript_56418.p2 ORF type:complete len:84 (+),score=24.23 R_Transcript_56418:145-396(+)
ATGGGGAGGATACCACGCATCAAGTTCCCTCAAAGGCACCTCAAACCCTCTTCATCTTCTGTAGGTGCTGAATCACAAGGAAAGGTGGCATCTGCATCTACAAGCCAGCAGCCTTCAATATCAAAGCCAGATGTTCCTGCTGCACCCGCACGCCCAGCTGCAGCTGGAGGAGGCAAAGCCTCACTTCAGCCAAAGCGCACACCAGTCTCAGACAAGGAGATCGAAGCTATATTGTTGGGTGGCTGTATTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56418.p2 GENE.R_Transcript_56418~~R_Transcript_56418.p2 ORF type:complete len:84 (+),score=24.23 R_Transcript_56418:145-396(+)
MGRIPRIKFPQRHLKPSSSSVGAESQGKVASASTSQQPSISKPDVPAAPARPAAAGGGKASLQPKRTPVSDKEIEAILLGGCI*

Click here to download the sequence:
Link to NCBI Protein BLAST