Transcript Information: R_Transcript_56453.p1


Annotated TAIR IDAT2G30260.1
Annotated Gene NameU2 small nuclear ribonucleoprotein B
Annotated Gene Symbol(s)U2B''
Annotation TypeOrtholog
Chromosome Positionchr2:12905557-12907434 | Reverse length=232
E-Value1.3E-124
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 178.912585506823
Replicate 277.559609727446
Replicate 377.310239387015
Condition 2: 8 Hour
Replicate 166.808415998303
Replicate 271.034353090318
Replicate 372.058764574898
Condition 3: 24 Hour
Replicate 199.945626293022
Replicate 289.55195635743
Replicate 385.380916989837


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56453.p1 GENE.R_Transcript_56453~~R_Transcript_56453.p1 ORF type:complete len:232 (+),score=61.29,RRM_1|PF00076.18|6.6e-09,RRM_1|PF00076.18|1.2e-14,RRM_5|PF13893.2|9.3e-10,RRM_5|PF13893.2|0.0028,RRM_6|PF14259.2|0.0016,RRM_6|PF14259.2|0.00015 R_Transcript_56453:479-1174(+)
ATGCTGTCAGGTGATATACCCCCCAATCAATCCATTTACATCAAAAATCTCAATGAGAAGGTCAAGAAAGAAGAATTGAAGCGATCTCTATATTGTTTGTTCTCTCAGTTTGGAAGGATCTTGGATGTGGTGGCTTTGAAAACTCCCAAACTTCGAGGACAAGCCTGGGTTTGTTTTGCTGAAATTACTGCTGCCAGTAATGCTGTTCGCCAAATGCAAAACTTCCCTTTCTACGATAAACCTATTCGGATACAATATGCAAAATCCAAGTCTGATTGTATCGCTAAAGCTGAGGGAACCTATGTTCCCAAGGAAAAGAAGAAGAAACAAGAGGACAAAGCTGAAAAGAAGCGACGTGCTGATGAATCTCAACAAACTGCTGCTAATGGTAGTTCTGCTCAAAACAATGGTGGCCCACCTGCACCATTCCGGAAAGCTGGTGGACAGGAAGCAGCAGCAGCTCCGAACAGTATTTTGTTTGTACAGAATTTGCCTCATGAGACAACGAGCGTAATGCTGCAAATGCTGTTCCAGCAGTACCCCGGTTTCAGGGAAGTTCGAATGATTGAAGCAAAGCCAGGCATCGCATTTGTAGAGTTTGAAGATGAGGACCAATCTACAGTAGCAATGCAGGCACTCCAGGGCTTCAAGGTTACACCTCAGAATCCCATGGAAATCACGTATGCTAAGAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56453.p1 GENE.R_Transcript_56453~~R_Transcript_56453.p1 ORF type:complete len:232 (+),score=61.29,RRM_1|PF00076.18|6.6e-09,RRM_1|PF00076.18|1.2e-14,RRM_5|PF13893.2|9.3e-10,RRM_5|PF13893.2|0.0028,RRM_6|PF14259.2|0.0016,RRM_6|PF14259.2|0.00015 R_Transcript_56453:479-1174(+)
MLSGDIPPNQSIYIKNLNEKVKKEELKRSLYCLFSQFGRILDVVALKTPKLRGQAWVCFAEITAASNAVRQMQNFPFYDKPIRIQYAKSKSDCIAKAEGTYVPKEKKKKQEDKAEKKRRADESQQTAANGSSAQNNGGPPAPFRKAGGQEAAAAPNSILFVQNLPHETTSVMLQMLFQQYPGFREVRMIEAKPGIAFVEFEDEDQSTVAMQALQGFKVTPQNPMEITYAKK*

Click here to download the sequence:
Link to NCBI Protein BLAST