Transcript Information: R_Transcript_56458.p1


Annotated TAIR IDAT2G03270.1
Annotated Gene NameDNA-binding protein, putative
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:994071-995990 | Forward length=639
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.6262141400819
Replicate 25.163534620897
Replicate 37.1944124005694
Condition 2: 8 Hour
Replicate 17.6541000057315
Replicate 29.6731518483351
Replicate 311.966617371959
Condition 3: 24 Hour
Replicate 111.699978794563
Replicate 29.2795459628503
Replicate 312.938065437144


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56458.p1 GENE.R_Transcript_56458~~R_Transcript_56458.p1 ORF type:complete len:675 (+),score=166.52,AAA_11|PF13086.2|3.7e-60,AAA_11|PF13086.2|1.2e+02,AAA_12|PF13087.2|2.3e-58,AAA_19|PF13245.2|1.3e-12,AAA_30|PF13604.2|2.2e-10,AAA_30|PF13604.2|5.1e+03,Viral_helicase1|PF01443.14|1,Viral_helicase1|PF01443.14|0.0073,Viral_helicase1|PF01443.14|0.0019,ResIII|PF04851.11|2.1e-05 R_Transcript_56458:77-2026(+)
ATGAATAAAGCAAAGACTTCTTCTAACAAACCTCCTCCTCCCATTTCCCTTGACCAATTTGTGTCCACCATGGCCCCTTTACTTGACATTGAAAAGGAAGCTGAGATATCTGCTTCAATAAATTCTGGGTCATCAAGGAGTATTGAAACTGCTCAGAAAAGGGGTTCCACTATTCTTAATTTGAAGTGCACTGATGTTCAGACAGGATTGATGGGGAAGAGTCTTATTGAATTCCAATCTACAAAAGGAGATGTTCTCCCTCCACACAAATTTGGACCTCATGATGTGGTTGTTCTGAAACCGAACAAGGCGGATACATGGTCTCCTCCCCTTGGTCAAGGTGTGGTTTACCGTTTGAAGGATTCATCTATCACCGTTGCATTTGATGATATTCCGGAAGATGGTCTAAGTAATCCATTGCGACTGGAGAAAGTGGCAAATGAGGTGACTTACCGTAGGATGAAAGATACCCTTATAGAGCTCAGTAAAGGTGTGCAGAAAGGTCCTGCTGCTGATGTAGTCCCTGTATTATTTGGAGAACGACAGCCTGGAAAGTCAAAGAAAGATGTTACTTTCTCTCTGTTTAACTCAAACCTGGATCACTCTCAGAAAGATGCAATTTCTAAGGCCCTGTCATCCAAGGAAGTATTTTTGCTGCATGGACCTCCTGGAACGGGGAAAACTACAACTGTCGTAGAGATTATATTACAAGAAGTGAAGCGTGGATCAAAGATACTTGCATGTGCTGCATCAAATATTGCTGTTGACAATATTGTTGAGCGTCTTGTTTCTCACAGGGTCAAGCTTGTGAGAGTAGGCCATCCTGCACGTTTGCTGCCTCAAGTACTGGAAAGTGCTCTAGACGCACAGGTTCTACGGGGTGACAACAATGCTTTGGCAAATGACATTCGGAAAGAAATAAAGGCACTAAATGGGAAGCTGCTCAAGTGTAAGGACAAAACTACCAAAAGCCAAATCATGAAGGAGCTCCGTACCCTTTCTAAGGAGGAGCGCAAAAGGCAACAGCTGGCTGTGACTGATGTTATAAAAAATGCGGATGTCATATTGACAACTTTAACTGGAGCATTGTCTAGAAAGCTGGACAGGACAACTTTTGACTTGGTGATTATCGATGAAGCTGCACAAGCACTTGAAATTGCATGCTGGATAGCTCTGTTGAAGGGTTCAAGATGTATTCTTGCTGGAGATCATCTCCAGCTTCCACCAACTATTCAGAGTGTTGAAGCTGAAAAGAAAGGGTTGGGAAGAACATTATTTGAACGCCTTGCAGACTTGTATGGGGATGATATCATGTCAATGCTCACCGTTCAGTACCGCATGCATGAACATATCATGGAATGGTCATCAAAAGAACTATATAATAGTAAGATCAAAGCACATTCAAGTGTTGCTGGGCATATGCTTTATGACTTGGAGGGTGTCAACAAAACACCAGCAACAGAACCAACCCTTCTGCTCATTGACACAGCAGGTTGTGATATGGAGGAGAAGAAGGATGAAGAAGACAGCACATTGAATGAGGGTGAAGCTGAAGTTGCAGTTGGTCATGCAAAAAGGCTGGTTGAAAGTGGGGTCCGGGCTGCTGATATCGGAATAATTACACCTTATAATGCCCAGGTTGTGCTACTAAAGATGTTGAGGAGCAATGTAGACAAGCTAAAGGATGTGGAAATATCAACAGTTGATGGCTTCCAAGGTCGGGAAAAGGAAGCTCTTATTATTTCAATGGTCAGATCAAACTCAAAGAGCGAGGTGGGGTTTCTGAGCGACCGCAGGAGGATGAATGTGGCAGTGACTCGAGCCAGGAGACAGTGTTGTCTGGTATGTGACACTGAAACTGTGAGTAGTGACCAATTCTTGAAGAGATTAATTGAATATTTTGAGGAGCATGGCGAGTATCTAGGTGCTTCGGAATATGGAAATCAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56458.p1 GENE.R_Transcript_56458~~R_Transcript_56458.p1 ORF type:complete len:675 (+),score=166.52,AAA_11|PF13086.2|3.7e-60,AAA_11|PF13086.2|1.2e+02,AAA_12|PF13087.2|2.3e-58,AAA_19|PF13245.2|1.3e-12,AAA_30|PF13604.2|2.2e-10,AAA_30|PF13604.2|5.1e+03,Viral_helicase1|PF01443.14|1,Viral_helicase1|PF01443.14|0.0073,Viral_helicase1|PF01443.14|0.0019,ResIII|PF04851.11|2.1e-05 R_Transcript_56458:77-2026(+)
MNKAKTSSNKPPPPISLDQFVSTMAPLLDIEKEAEISASINSGSSRSIETAQKRGSTILNLKCTDVQTGLMGKSLIEFQSTKGDVLPPHKFGPHDVVVLKPNKADTWSPPLGQGVVYRLKDSSITVAFDDIPEDGLSNPLRLEKVANEVTYRRMKDTLIELSKGVQKGPAADVVPVLFGERQPGKSKKDVTFSLFNSNLDHSQKDAISKALSSKEVFLLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVSHRVKLVRVGHPARLLPQVLESALDAQVLRGDNNALANDIRKEIKALNGKLLKCKDKTTKSQIMKELRTLSKEERKRQQLAVTDVIKNADVILTTLTGALSRKLDRTTFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTIQSVEAEKKGLGRTLFERLADLYGDDIMSMLTVQYRMHEHIMEWSSKELYNSKIKAHSSVAGHMLYDLEGVNKTPATEPTLLLIDTAGCDMEEKKDEEDSTLNEGEAEVAVGHAKRLVESGVRAADIGIITPYNAQVVLLKMLRSNVDKLKDVEISTVDGFQGREKEALIISMVRSNSKSEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDQFLKRLIEYFEEHGEYLGASEYGNQ*

Click here to download the sequence:
Link to NCBI Protein BLAST