Transcript Information: R_Transcript_56458.p2


Annotated TAIR IDAT3G57600.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:21332841-21333674 | Forward length=277
E-Value4.5E-63
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.14930405455637
Replicate 20
Replicate 30.22136110512667
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56458.p2 GENE.R_Transcript_56458~~R_Transcript_56458.p2 ORF type:complete len:164 (-),score=34.70,AP2|PF00847.16|2.1e-13,AP2|PF00847.16|5.9e+03 R_Transcript_56458:2510-3001(-)
ATGGAGACCTTCAGAAACTCACCCTTGAAACCATGGAAGAAGGGCCCTACAAGAGGCAAAGGCGGGCCCCAGAATGCGACCTGTACTTACCGCGGTGTGAGACAAAGAACCTGGGGCAAATGGGTGGCGGAAATCAGAGAACCAAAGAAGAGAACTCGTCTTTGGTTAGGCTCGTTTGCCACTGCTGAAGAAGCTGCCATGGCTTATGATGAAGCTGCTAGACGGCTTTATGGACCGGATGCTTATCTCAACTTACCCCATTTAAGATGCAATTTCAACCCACTTAACAAATCGCAGAAGTTTCGTTGGTTCCCTTCCAGGAATTTCATCTCCATGTTCCCTTCGAGTGAGAGTGAAGTTACTACTGAGCAGACGAATCTTGGACCAGCTGAAGAAGTTGACGATGATATCTTTGCTGAGACGAGTTCTGAATGGGATGGACTTGAGATGCTTAGAGTGGAGGGGCATCAACAGGCTGGATTGAGCAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56458.p2 GENE.R_Transcript_56458~~R_Transcript_56458.p2 ORF type:complete len:164 (-),score=34.70,AP2|PF00847.16|2.1e-13,AP2|PF00847.16|5.9e+03 R_Transcript_56458:2510-3001(-)
METFRNSPLKPWKKGPTRGKGGPQNATCTYRGVRQRTWGKWVAEIREPKKRTRLWLGSFATAEEAAMAYDEAARRLYGPDAYLNLPHLRCNFNPLNKSQKFRWFPSRNFISMFPSSESEVTTEQTNLGPAEEVDDDIFAETSSEWDGLEMLRVEGHQQAGLSS*

Click here to download the sequence:
Link to NCBI Protein BLAST