Transcript Information: R_Transcript_56477.p1


Annotated TAIR IDAT5G51160.1
Annotated Gene NameAnkyrin repeat family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:20792280-20793681 | Forward length=442
E-Value2E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.706540359144
Replicate 29.1249744425262
Replicate 310.438513334956
Condition 2: 8 Hour
Replicate 16.8188484663214
Replicate 26.5101301562945
Replicate 37.1227839143291
Condition 3: 24 Hour
Replicate 18.2338127187968
Replicate 27.7239936199068
Replicate 37.5729611152978


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56477.p1 GENE.R_Transcript_56477~~R_Transcript_56477.p1 ORF type:complete len:237 (+),score=46.95,Ank_2|PF12796.3|4.4e-09,Ank_2|PF12796.3|7.5e-13,Ank_2|PF12796.3|2.7e-08,Ank_5|PF13857.2|1.3e+03,Ank_5|PF13857.2|9.9e-07,Ank_5|PF13857.2|0.013,Ank_5|PF13857.2|0.00013,Ank_5|PF13857.2|5.7e-07,Ank_4|PF13637.2|2.2e+03,Ank_4|PF13637.2|5.8e-07,Ank_4|PF13637.2|0.0051,Ank_4|PF13637.2|4.1e-07,Ank_4|PF13637.2|0.0085,Ank_3|PF13606.2|0.0096,Ank_3|PF13606.2|1.3,Ank_3|PF13606.2|0.0019,Ank_3|PF13606.2|0.02,Ank|PF00023.26|0.57,Ank|PF00023.26|22,Ank|PF00023.26|2.2,Ank|PF00023.26|0.096 R_Transcript_56477:105-815(+)
ATGGAAGAGAAAAGTGAGAGAGTTGAATTACTAGCCATAAGGCTATATGATGCAGCACTTGAGGGAGATTTACCTTCCTTGCTCACCTTACTCCAAGAAGATCCCTTCATCCTTCATAGATGTACCATTTTAATTGATCACAAAACAGGTCAATTATTCAACCAGTCACCCCTACATGTAGCTGCGAACCTCGGGCACTTGGAGATTGTGAAAGCTTTGCTCAAAGTGACCCCTGATTTGTGCCTTGTAACTGACCATCAAGGAAGGAATCCTGTTCATGTTGCAGCTGTTCGAGGTCACAAACTTGTGATTGAACAGCTCGTTCGAGCCAAGCCTCAGGCAGCTAGGGAGCGGACCAGCTGTGGCGAAACTGTTTTGCACTTGTGCATCAAACACAATCACCCAGACACTCTCGAGTTCTTGGTAGATGACATGGATTATGTTGAGCTGCTTAACTCAAAAGATAGTGACGGTAACACCATCCTGCACCTAGCAGTTGCTGCCAAACAAACTGAGACCATAAAGTCCCTACTCAAGAACAAAAACTTGGAGAAAAATGTTATCAACATAAGTGGTTTGACGGCAATGGACATTTACACTCAAAGTAAAAAGAATGATACAAGTGACAAGGAGATTGGGCGTTCCCTCAAGCGTGCCAAAGCAGTCCGAGCGAAAAAAATTGCTGAAGAAAGCCAAAAAGGATCCTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56477.p1 GENE.R_Transcript_56477~~R_Transcript_56477.p1 ORF type:complete len:237 (+),score=46.95,Ank_2|PF12796.3|4.4e-09,Ank_2|PF12796.3|7.5e-13,Ank_2|PF12796.3|2.7e-08,Ank_5|PF13857.2|1.3e+03,Ank_5|PF13857.2|9.9e-07,Ank_5|PF13857.2|0.013,Ank_5|PF13857.2|0.00013,Ank_5|PF13857.2|5.7e-07,Ank_4|PF13637.2|2.2e+03,Ank_4|PF13637.2|5.8e-07,Ank_4|PF13637.2|0.0051,Ank_4|PF13637.2|4.1e-07,Ank_4|PF13637.2|0.0085,Ank_3|PF13606.2|0.0096,Ank_3|PF13606.2|1.3,Ank_3|PF13606.2|0.0019,Ank_3|PF13606.2|0.02,Ank|PF00023.26|0.57,Ank|PF00023.26|22,Ank|PF00023.26|2.2,Ank|PF00023.26|0.096 R_Transcript_56477:105-815(+)
MEEKSERVELLAIRLYDAALEGDLPSLLTLLQEDPFILHRCTILIDHKTGQLFNQSPLHVAANLGHLEIVKALLKVTPDLCLVTDHQGRNPVHVAAVRGHKLVIEQLVRAKPQAARERTSCGETVLHLCIKHNHPDTLEFLVDDMDYVELLNSKDSDGNTILHLAVAAKQTETIKSLLKNKNLEKNVINISGLTAMDIYTQSKKNDTSDKEIGRSLKRAKAVRAKKIAEESQKGSS*

Click here to download the sequence:
Link to NCBI Protein BLAST