Transcript Information: R_Transcript_56478.p1


Annotated TAIR IDAT5G51160.1
Annotated Gene NameAnkyrin repeat family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:20792280-20793681 | Forward length=442
E-Value3E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3689720716039
Replicate 20.37493393600532
Replicate 30.73628799416204
Condition 2: 8 Hour
Replicate 10.2623485530062
Replicate 20.23958087686985
Replicate 30.25930872314838
Condition 3: 24 Hour
Replicate 10.98390602404446
Replicate 20.94522538102474
Replicate 31.1725556082266


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56478.p1 GENE.R_Transcript_56478~~R_Transcript_56478.p1 ORF type:3prime_partial len:280 (+),score=61.97,Ank_5|PF13857.2|1.6e+03,Ank_5|PF13857.2|3.2e-08,Ank_5|PF13857.2|0.018,Ank_5|PF13857.2|2.6e-08,Ank_5|PF13857.2|3.9e-06,Ank_5|PF13857.2|1.2e+04,Ank_4|PF13637.2|2.8e+03,Ank_4|PF13637.2|2.7e-06,Ank_4|PF13637.2|0.012,Ank_4|PF13637.2|2.4e-06,Ank_4|PF13637.2|0.36,Ank_4|PF13637.2|2.4e+03,Ank_2|PF12796.3|1.8e-08,Ank_2|PF12796.3|9.6e-07,Ank_2|PF12796.3|9e+02,Ank_3|PF13606.2|0.016,Ank_3|PF13606.2|2.1,Ank_3|PF13606.2|0.0016,Ank_3|PF13606.2|0.18,Ank_3|PF13606.2|1.6e+04,PGG|PF13962.2|7.2e-10,Ank|PF00023.26|1.3,Ank|PF00023.26|71,Ank|PF00023.26|9.9,Ank|PF00023.26|3.4 R_Transcript_56478:105-941(+)
ATGGAAGAGAAAAGTGAGAGAGTTGAATTACTAGCCATAAGGCTATATGATGCAGCACTTGAGGGAGATTTACCTTCCTTGCTCACCTTACTCCAAGAAGATCCCTTCATCCTTCATAGATGTACCATTTTAATTGATCACAAAACAGGTCAATTATTCAACCAGTCACCCCTACATGTAGCTGCGAACCTCGGGCACTTGGAGATTGTGAAAGCTTTGCTCAAAGTGAGCCCTGAAATGTGCCTTGTAACTGACCATCAAGGAAGGAATCCTGTTCATGTTGCAGCTGTTCGAGGTCACAAGCTTGTGCTTGAGGAGCTCGTTCGAGCCATGCCTCAGGCAGCTAGGGAACGGACCAGCTGTGGTGAAACTGTTTTGCACTTGTGCATCAAACACAATCACCCAGATGCTCTCGACTTCCTGGTAGATGTCATGGATTATGGTGAGCTACTTAACTTAAAAGATAGCGACGGTAACACCATCTTTCACTTAGCAGTTGCTGCCAAACAATCTGAGACCATAAAGTCCCTACTCAAGAACAAAAACTTGGAGAAAAATGTTATCAACATAAGTGGTTTGACGGCAATGGACATTTACACTCAAAGTAAAAAGAATGATCCAAGTGACAAGGAGATTGGGCATTCCCTCAAGCGTGCCAAAGCATTACGAGCCAAAATATTGCTGAAGAAACCCAAAGAAGATCCTCATAGTAGGTTGGAGAAACACCGCAATGCTCTAATGGTGGTGGCATCACTTATAGCAACCATGGCTTTCCAAGTTGGTGTTAGCCCTCCTGGTGGCACTTACCAAGATACCAACAGTAACCATACAGCAGGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56478.p1 GENE.R_Transcript_56478~~R_Transcript_56478.p1 ORF type:3prime_partial len:280 (+),score=61.97,Ank_5|PF13857.2|1.6e+03,Ank_5|PF13857.2|3.2e-08,Ank_5|PF13857.2|0.018,Ank_5|PF13857.2|2.6e-08,Ank_5|PF13857.2|3.9e-06,Ank_5|PF13857.2|1.2e+04,Ank_4|PF13637.2|2.8e+03,Ank_4|PF13637.2|2.7e-06,Ank_4|PF13637.2|0.012,Ank_4|PF13637.2|2.4e-06,Ank_4|PF13637.2|0.36,Ank_4|PF13637.2|2.4e+03,Ank_2|PF12796.3|1.8e-08,Ank_2|PF12796.3|9.6e-07,Ank_2|PF12796.3|9e+02,Ank_3|PF13606.2|0.016,Ank_3|PF13606.2|2.1,Ank_3|PF13606.2|0.0016,Ank_3|PF13606.2|0.18,Ank_3|PF13606.2|1.6e+04,PGG|PF13962.2|7.2e-10,Ank|PF00023.26|1.3,Ank|PF00023.26|71,Ank|PF00023.26|9.9,Ank|PF00023.26|3.4 R_Transcript_56478:105-941(+)
MEEKSERVELLAIRLYDAALEGDLPSLLTLLQEDPFILHRCTILIDHKTGQLFNQSPLHVAANLGHLEIVKALLKVSPEMCLVTDHQGRNPVHVAAVRGHKLVLEELVRAMPQAARERTSCGETVLHLCIKHNHPDALDFLVDVMDYGELLNLKDSDGNTIFHLAVAAKQSETIKSLLKNKNLEKNVINISGLTAMDIYTQSKKNDPSDKEIGHSLKRAKALRAKILLKKPKEDPHSRLEKHRNALMVVASLIATMAFQVGVSPPGGTYQDTNSNHTAG

Click here to download the sequence:
Link to NCBI Protein BLAST