Transcript Information: R_Transcript_56479.p1


Annotated TAIR IDAT5G51160.1
Annotated Gene NameAnkyrin repeat family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:20792280-20793681 | Forward length=442
E-Value4E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.8848070474412
Replicate 21.0256813421755
Replicate 31.3164791721927
Condition 2: 8 Hour
Replicate 10.98506353236044
Replicate 20.57829866830652
Replicate 31.0953558132992
Condition 3: 24 Hour
Replicate 12.1770334440064
Replicate 20.95065771080075
Replicate 30.94343554684902


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56479.p1 GENE.R_Transcript_56479~~R_Transcript_56479.p1 ORF type:3prime_partial len:348 (+),score=51.92,Ank_5|PF13857.2|2.1e+03,Ank_5|PF13857.2|4.6e-08,Ank_5|PF13857.2|0.12,Ank_5|PF13857.2|3.1e-08,Ank_5|PF13857.2|5.5e-06,Ank_5|PF13857.2|1.5e+03,PGG|PF13962.2|3.4e-23,Ank_2|PF12796.3|2.7e-08,Ank_2|PF12796.3|6.3e-07,Ank_2|PF12796.3|7.5e+02,Ank_4|PF13637.2|3.9e+03,Ank_4|PF13637.2|3.7e-06,Ank_4|PF13637.2|0.0066,Ank_4|PF13637.2|3.7e-06,Ank_4|PF13637.2|0.49,Ank_4|PF13637.2|3.8e+03,Ank_3|PF13606.2|0.021,Ank_3|PF13606.2|2.8,Ank_3|PF13606.2|0.0089,Ank_3|PF13606.2|0.25,Ank_3|PF13606.2|1.6e+04,Ank|PF00023.26|1.7,Ank|PF00023.26|95,Ank|PF00023.26|5.3,Ank|PF00023.26|4.5 R_Transcript_56479:105-1145(+)
ATGGAAGGGAAAAGTGAGAGAGTTCAATTACCAGCCATAAGGTTATATGATGCAGCACTTGAGGGAGATTTACCTTCCTTGCTCACCTTACTCCAAGAAGATCCCTTCATCCTTCATAGATGTACCATTTTAATTGATCACAAAACAGGTCAATTATTCAACCAGTCACCCCTACATGTAGCTGCGAACCTCGGGCACTTGGAGATTGTGAAAGCTTTGCTCAAAGTGAGCCCTGAAATGTGCCTTGTAACTGACCATCAAGGAAGGAATCCTGTTCATGTTGCAGCTGTTCGAGGTCACAAGCTTGTGCTTGAGGAGCTCGTTCGAGCCATGCCTCAGGCAGCTAGGGAACGGACCAGCTGTGGTGAAACTGTTTTGCACTTGTGCGTCAAACACAATCACCCAGACGCTCTCGAGTTGTTGGTAGATGTCATGGATTATGGTGAGCTACTTAACTTAAAAGATAGCGACGGTAACACCATCTTTCACTTAGCAGTTGCTGCCAAACAATCTGAGACCATAAAGTCCCTACTCAAGAACAAAAACTTGGAGAAAAATGTTATCAACATAAGTGGTTTGACGGCAATGGACATTTACACTCAAAGTAAAAAGAATGATCCAAGTGACAAGGAAATTAATCATTCCCTGAAGCGTGCCAAATCATTACGAGCCAAAAAATTGCTGAAGAAACCCAAAGAAGATCCTCATAGTAGGTTGGAGAAACACCGCAATGCTCTAATGGTGGTGGCATCACTTATAGCAACCATGGCTTTCCAAGTTGGTGTTAACCCTCCTGGTGGCACATACCAAGATAACAACGATGGCAATAACGCAGGTTCTCCCATAATATTAAGCGTTGACGATGGGGAGATGTATAACAAGATACTGATATTGAACACCATAGCCTTTGTTTCGTCTCTAAGTGTGATATTTCTGCTTATAAGTGGACTGCCATGCAAGCGACTGTTTGTGGTAATTTTGATGATAACCATGTGGATTGCAGTCTCAGCAACTACATTTACGTATTCGCTCTCCGTTGCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56479.p1 GENE.R_Transcript_56479~~R_Transcript_56479.p1 ORF type:3prime_partial len:348 (+),score=51.92,Ank_5|PF13857.2|2.1e+03,Ank_5|PF13857.2|4.6e-08,Ank_5|PF13857.2|0.12,Ank_5|PF13857.2|3.1e-08,Ank_5|PF13857.2|5.5e-06,Ank_5|PF13857.2|1.5e+03,PGG|PF13962.2|3.4e-23,Ank_2|PF12796.3|2.7e-08,Ank_2|PF12796.3|6.3e-07,Ank_2|PF12796.3|7.5e+02,Ank_4|PF13637.2|3.9e+03,Ank_4|PF13637.2|3.7e-06,Ank_4|PF13637.2|0.0066,Ank_4|PF13637.2|3.7e-06,Ank_4|PF13637.2|0.49,Ank_4|PF13637.2|3.8e+03,Ank_3|PF13606.2|0.021,Ank_3|PF13606.2|2.8,Ank_3|PF13606.2|0.0089,Ank_3|PF13606.2|0.25,Ank_3|PF13606.2|1.6e+04,Ank|PF00023.26|1.7,Ank|PF00023.26|95,Ank|PF00023.26|5.3,Ank|PF00023.26|4.5 R_Transcript_56479:105-1145(+)
MEGKSERVQLPAIRLYDAALEGDLPSLLTLLQEDPFILHRCTILIDHKTGQLFNQSPLHVAANLGHLEIVKALLKVSPEMCLVTDHQGRNPVHVAAVRGHKLVLEELVRAMPQAARERTSCGETVLHLCVKHNHPDALELLVDVMDYGELLNLKDSDGNTIFHLAVAAKQSETIKSLLKNKNLEKNVINISGLTAMDIYTQSKKNDPSDKEINHSLKRAKSLRAKKLLKKPKEDPHSRLEKHRNALMVVASLIATMAFQVGVNPPGGTYQDNNDGNNAGSPIILSVDDGEMYNKILILNTIAFVSSLSVIFLLISGLPCKRLFVVILMITMWIAVSATTFTYSLSVA

Click here to download the sequence:
Link to NCBI Protein BLAST