Transcript Information: R_Transcript_56554.p1


Annotated TAIR IDAT5G55560.1
Annotated Gene NameProtein kinase superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:22506477-22507757 | Reverse length=314
E-Value3.4E-169
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.4291082149698
Replicate 27.5335562955488
Replicate 37.7624160624835
Condition 2: 8 Hour
Replicate 17.9721420758473
Replicate 211.514739818551
Replicate 310.975392468141
Condition 3: 24 Hour
Replicate 19.533973101206
Replicate 29.4522538102474
Replicate 39.8894612538805


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56554.p1 GENE.R_Transcript_56554~~R_Transcript_56554.p1 ORF type:complete len:301 (+),score=64.98,Pkinase|PF00069.21|5.1e-53,Pkinase_Tyr|PF07714.13|2.3e-39 R_Transcript_56554:165-1067(+)
ATGCCTTGCGAGAGTCTTGATCCACCACCTGAGGGTGATAAAGAGCCATTTGTAGAGGTTGACCCGTCTGGTCGATTTGGCCGGTACCATGAATTACTTGGGGCTGGAGCTGTGAAGAAAGTTTATAGGGCATTTGATCAAGAGGAAGGCATAGAGGTTGCCTGGAACCAGGTTAGGCTTAAGAACTTCAGCCAAGATCCATCAGTCATTGATAGGCTTCTCTCAGAAGTTGAGCTGCTGAGCAAGCTGAGGAACAACAACATCATCACTTTGTACTATGTGTGGAGCGATGCTGAGCGCAGCACAATGAACTTCATCACTGAGATCTGCACCTCTGGGAACTTGAGAGAGTACAGGAAGAAGCATCGTCACGTGTCAATTAAAGCTCTGAAGAAATGGTCGATACAGGTGCTCAAGGGTTTGGAGTATCTTCACACTCACGAACCTTGCATTATTCACCGGGACCTCAACTGCAGTAACATCTTCATAAATGGAAACGTTGGGGAGGTGAAAATCGGTGACTTTGGCTTGGCAGCAATCGTGGGCAAGAGCCATGTAGCGCACTCGATACTGGGAACACCAGAATACATGGCCCCAGAGCTGTACGAGGAAGACTACACAGAGGTGGTGGACATATATTCATTTGGAATGTGTGTACTAGAGATGGTCACATTGGAGATCCCGTATAGCGAGTGTGATAGTATTGCAAAGATATACAAGAAGGTGACCACAGGGATCAAACCCTTGGCTTTCCAGAAGGTGACAGATCTGGAGGTGAAGGCGTTTATTGAAAAGTGCATCGCAAAGCCAAGGGCAAGGCCCTCTGCTTCTGAACTCCTCAAGGATCCCTTTTTCTTTGAAGTTATTGATGATGACGAAGATGCTAGCAACGATTCTTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56554.p1 GENE.R_Transcript_56554~~R_Transcript_56554.p1 ORF type:complete len:301 (+),score=64.98,Pkinase|PF00069.21|5.1e-53,Pkinase_Tyr|PF07714.13|2.3e-39 R_Transcript_56554:165-1067(+)
MPCESLDPPPEGDKEPFVEVDPSGRFGRYHELLGAGAVKKVYRAFDQEEGIEVAWNQVRLKNFSQDPSVIDRLLSEVELLSKLRNNNIITLYYVWSDAERSTMNFITEICTSGNLREYRKKHRHVSIKALKKWSIQVLKGLEYLHTHEPCIIHRDLNCSNIFINGNVGEVKIGDFGLAAIVGKSHVAHSILGTPEYMAPELYEEDYTEVVDIYSFGMCVLEMVTLEIPYSECDSIAKIYKKVTTGIKPLAFQKVTDLEVKAFIEKCIAKPRARPSASELLKDPFFFEVIDDDEDASNDSS*

Click here to download the sequence:
Link to NCBI Protein BLAST