Transcript Information: R_Transcript_56607.p1


Annotated TAIR IDAT4G01860.1
Annotated Gene NameTransducin family protein / WD-40 repeat family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:801713-808018 | Reverse length=1308
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.3403233304683
Replicate 21.8251094471064
Replicate 32.8304302202142
Condition 2: 8 Hour
Replicate 13.2718181610543
Replicate 23.7589413439924
Replicate 34.5379026550967
Condition 3: 24 Hour
Replicate 14.9972813146511
Replicate 23.5015892347828
Replicate 34.3869752928479


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56607.p1 GENE.R_Transcript_56607~~R_Transcript_56607.p1 ORF type:complete len:1392 (+),score=259.49,WD40|PF00400.28|4.9,WD40|PF00400.28|0.0057,WD40|PF00400.28|0.097,WD40|PF00400.28|0.7,WD40|PF00400.28|3.6e+03,WD40|PF00400.28|3.6e+03,WD40|PF00400.28|0.095,WD40|PF00400.28|3.1e+03,WD40|PF00400.28|12,WD40|PF00400.28|10,WD40|PF00400.28|27,WD40|PF00400.28|3.3e+03 R_Transcript_56607:114-4289(+)
ATGAAGATGGAGGAAGAGAGAGAATGGAGAGTGAAAGCTGGGCAATACTTGGGAGAAATTTCCGCACTTTGTTTTCTCCATCTTCCTCCTCACTTTTCTTCCTTCCCTTACCTCCTTGCCGGAACAGGATCACAGATACTACTTTTTGACATAACCCTTGGTCAGCAGATAAAATCGTTTAATATATTTGAAGGAGTTCGTGTTCATGGAATTGCTGCTGCCTTAATGAACCAGGACAAAAATCCCGAATCCTCCTCTTTAACCTTCAAAATTGTTGTTTCTGGGGAGAGGAGGGTGAAACTATACAGCTTATCCCTTCAACTGCAGTCCAAGTCTCCTGAGTTACCACATCTTTCTACTGATTTAACCTTTTTACAGTTACTGCCCAGATTTACTCACTGGGTTCTAGATTTTCGTTTTTTACAGGACAATTTATCTTCTCTCAAAGACACACTGCATTATCTCGCAGTTGGCTGCGGTGATAATTCCGTTCATATTTGGGATACCTTAACTTTGACTCTGATTATTGAAGTTCAATGTCCTGAGAGGTGTCTTCTGTACTCGATGCGTCTGTGGGGCAATGAATTTGATGATCTTCATATTGCATCCGGTACCATCTATAATGAGATTGTCGTGTGGAAGTTGGTTCGTCAACATTACCCGGCATCTTTAACAAGCACAACAAAAGAGCCCAATATGATTGGCAGTTTTGATGGTTTTAACCAATCACAGCGTTACGGTTATGAAGCTCATATTGTTTCTACACTTGTAGGCCACCAAGGTTCTATCTTTTGCCTATCATGGTCAAGTGATGGATCCAAATTGATTTCTGTATCTGATGACCGCAGTGCTCGAATGTGGATAGCTGATACTGAATTGAGGACAACTGTCAATTCGAAAACATTATCTGGAACTTACTTGGCTGGTCCTATGCTGTTTGGTCATGGTGCTCGGGTTTGGGATTGCTGCATTTCTGATTCGCTGATAGTCACTGCTGGAGAGGATTGTACGTGCCGTGTATGGGGATTCGATGGCAAAGAGCTAAGAGTGATCAAAGAACATATGGGGAGGGGAATATGGCGATGTCTCTATGATCCAAATTCTTCACTTCTTGTGACCGCTGGGTTTGATTCTGCAATAAAAGCTCATTGTTTGCATTCTTCTTCGTCTGGATTTGCTGATGCATTTGTGAAAGGGTTAACTGAAAGAAGGGAGGAGGTCCTCAAAGTTTGCATCCCAAACTTATCAGGCCATATTGGGCTTATGGACAGTAAAAGTGAATATGTACGCTGTTTGAAGTTTGCTCGTCAGAATTCAATCTATGTGGCTACAAACCATGGTTTTGTGTATCATGCTATGCTTTCTGACTCTGGATCTGTGGAGTGGAATGAACTTGCCAGGGTTACTGAAGAGGTCCCAATTATTTGCATGGATTTGTTATCCAGAACCCAGTCAGAGCTGCCCCTTGGGGTCGAGGATTGGGTTGCTGTAGGAGATGGTAAAGGTGCCATGAAAGTACTCAAAGTTCTATTCGATGATTCTGTTCCTAAAGTGGCTGCTACAATTTCTTGGTCAGCTGAAATGGAAAGGCAACTCTTAGGTGCATATTGGTGCAAGTCATTAGGATGTGGGTTCATTTTCACATCTAATCCTAAGGGACTTGTGAAGCTTTGGAGGTGCCATGATCCTATATCTCATGATGCTATGAGATATAGCAATGTGTATCTAATTGCAGAATTCATGTCACCTTTTGGTGCGAGGATAATGTGTCTGGATGCATCCTGTGACGAAGAGGTACTAGTTTGTGGGGACTTGCGTGGTAACCTGGTTTTGTTTCCATTGTTGAAGAGCTCACTAGCTGATACGTCTCTGCAATTCATTGAGAAGACACCTTCTCTGACATATTTTAGAGGGGCTCATGGCATATCTACTGTTTCCAGCATCTCAATAGCCAGATTCAGCTCAAGTTCAGTAGAGATCCGCTCGACTGGAGCAGATGGATGCATATGCTATCTGGAATATGATAGAGATCGACATATTTTAGACTTTGTGGGAATGAAACAAATTAAAGAATTGAGCTTGGTTCAGTCTGTCTCTACTGACCATTATGGCCTGGATGATTCAGCAAGCAGCAGCTATGCAGTTGGTTTCTCATCAACTGATTTTTTGATTTGGAACTTACTCACTGAAACAAAGCTTTTGCAAGTCAAATGTGGGGGATGGCGTCGTCCTCATTCTTATCATCTTGGTGCTAAACCAGAGATCTGCAGCAGCTTTGCATATGTTAAGGATGAGATCATCTACATCCATAGGTACTGGGTACCAGATGGTGAGAAGAAAATTTTTCCCCGTAACCTTCATCTCCAGTTCCATGGAAGAGAGATCCACTCCTTATGCATTGTTTCTGCGGATTTCAAATCAGCTGTAAATATAGAGCAGTCTCTTCATACAAATTCGACCTGGATAGCTACTGGGTGTGAGGATGGTACTGTGAGGTTGACCAGGTATAGTCCTGGTGCTGAAAATTGGTCCACATCCAATTTACTTGGGGAACATGTTGGAGGTTCAGCTGTGAGATCGTTGTGTGTTGTGTCAAAGGTGCATCCAGGATATTCATCAGGAAAAAAGGGGGCCTGCAGGAACAATAGTTCCTCAGAGAACAATGAGGACCCATGTTTACTGATATCTGTTGGGGCAAAGCGGGTGCTAACCTCATGGTTACTGAGAAAGAGACCGGTGATTGACAGAGATGCATGTACTGATGGCTTGCAGAACAAGTGTGGAGACATGAAGTCTTCATCAGAGGATTCGTCTTCCTTGTCCTTCAAGTGGCTGTCCACAGACATGCCTGTTAAATGTGTCCGTGCTCGAACTATACAGGATAATGGTAACATAGTTACATCATTAAATAAAGTTCCAGGTGACGAATCTGATCCAACATCCATGGAGATGGAACCAAAACTGCATGGTGATGCACTTGATAATGACTGGAGATACCTGGCTGTTACTTCTTTTCTTGTTAGTGTTGCTGATACAAGGTTAACTGTGTGTTTTATTGTTGTTGCTTGCTCTGATGCCACTCTAATGCTGCGAGCCCTTATTCTGCCACACCGTTATTGGTTCGATGTTGCATGTTTGTCTCCCCTGCAATCACCTGTACTGTCCTTGCAGCATGTTGTTATTCCATTACGTCTTCCTTGTCAAGGTGTAATGACGAAGTACATATATATAGTGATCAGCGGATCAACTGATGGAAGCATTGCCTTCTGGGATCTTACTGAGAGTGTTGAAGTTTTTATGCAACAGATTTCATTTCTTCATTTAGAAAAGTTTATTGATTCTCAGAATCGACCACGCACTGGTAGAGGAAGCCAAGGTGGGCGACAGTGGAGATCTATTGATGCTGCTGTGGCTGCTAAAAGAGCTTCTGAGCATTTGATGACGTTGAATGATAAAGTTGTCTCTGATGACAGTAAGATTGTCGACAAGTACCCTATATCAACAATTTTGAGGGACCAACAACTATCTACTGATTCTATACAAACTTCATCTGGTGGATCTAAGGATAGTTGTAATGATTCTTCTGCCAGATTTTCTGTAATAAAGCCCTTGCATATTCTGAATAATGTGCACCAGTCTGGTGTCAATTGTCTGCACATCTGCTGCCAAAATCTTGGGAACAATTCAGAGTACAGCATTATAAGTGGGGGAGATGACCAAGCTCTTAACTTCTTGCGTTTTGTTATATCTCCTGTTATGAAACAATCAGATATAGACAATATGCAAGAAAATGACGTCTTGCTCATTAACATCTCGGAAATATTCCGCCAATCAGGAATCAGTGGAGACAGTGTGTGTTACTATCCAAACAAAAGTTATTCCATCAAGTTCTTATGTCAGAGGAAAGCCGTCTCAGCTCATAGTTCTGCCATAAAAGGAGTATGGACCAATGGGATTTGGGTATTCTCTACTGGTCTTGATCAGAGGCTGAGGTGCTGGAAAATTGAAAAGCATGGAAATCTAACCGAACACGGTCATTTTATTACTAGTGTACCAGAACCAGAAGCACTGGATGTGAGAGCTTGTGGCAGGAAGTGTTATGAAGTTGTTGTAGCTGGTAGAGGGATGCAAATAGTTGAGTTCTCCGTATCTTATGAAGAAGATGGAAGTGGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56607.p1 GENE.R_Transcript_56607~~R_Transcript_56607.p1 ORF type:complete len:1392 (+),score=259.49,WD40|PF00400.28|4.9,WD40|PF00400.28|0.0057,WD40|PF00400.28|0.097,WD40|PF00400.28|0.7,WD40|PF00400.28|3.6e+03,WD40|PF00400.28|3.6e+03,WD40|PF00400.28|0.095,WD40|PF00400.28|3.1e+03,WD40|PF00400.28|12,WD40|PF00400.28|10,WD40|PF00400.28|27,WD40|PF00400.28|3.3e+03 R_Transcript_56607:114-4289(+)
MKMEEEREWRVKAGQYLGEISALCFLHLPPHFSSFPYLLAGTGSQILLFDITLGQQIKSFNIFEGVRVHGIAAALMNQDKNPESSSLTFKIVVSGERRVKLYSLSLQLQSKSPELPHLSTDLTFLQLLPRFTHWVLDFRFLQDNLSSLKDTLHYLAVGCGDNSVHIWDTLTLTLIIEVQCPERCLLYSMRLWGNEFDDLHIASGTIYNEIVVWKLVRQHYPASLTSTTKEPNMIGSFDGFNQSQRYGYEAHIVSTLVGHQGSIFCLSWSSDGSKLISVSDDRSARMWIADTELRTTVNSKTLSGTYLAGPMLFGHGARVWDCCISDSLIVTAGEDCTCRVWGFDGKELRVIKEHMGRGIWRCLYDPNSSLLVTAGFDSAIKAHCLHSSSSGFADAFVKGLTERREEVLKVCIPNLSGHIGLMDSKSEYVRCLKFARQNSIYVATNHGFVYHAMLSDSGSVEWNELARVTEEVPIICMDLLSRTQSELPLGVEDWVAVGDGKGAMKVLKVLFDDSVPKVAATISWSAEMERQLLGAYWCKSLGCGFIFTSNPKGLVKLWRCHDPISHDAMRYSNVYLIAEFMSPFGARIMCLDASCDEEVLVCGDLRGNLVLFPLLKSSLADTSLQFIEKTPSLTYFRGAHGISTVSSISIARFSSSSVEIRSTGADGCICYLEYDRDRHILDFVGMKQIKELSLVQSVSTDHYGLDDSASSSYAVGFSSTDFLIWNLLTETKLLQVKCGGWRRPHSYHLGAKPEICSSFAYVKDEIIYIHRYWVPDGEKKIFPRNLHLQFHGREIHSLCIVSADFKSAVNIEQSLHTNSTWIATGCEDGTVRLTRYSPGAENWSTSNLLGEHVGGSAVRSLCVVSKVHPGYSSGKKGACRNNSSSENNEDPCLLISVGAKRVLTSWLLRKRPVIDRDACTDGLQNKCGDMKSSSEDSSSLSFKWLSTDMPVKCVRARTIQDNGNIVTSLNKVPGDESDPTSMEMEPKLHGDALDNDWRYLAVTSFLVSVADTRLTVCFIVVACSDATLMLRALILPHRYWFDVACLSPLQSPVLSLQHVVIPLRLPCQGVMTKYIYIVISGSTDGSIAFWDLTESVEVFMQQISFLHLEKFIDSQNRPRTGRGSQGGRQWRSIDAAVAAKRASEHLMTLNDKVVSDDSKIVDKYPISTILRDQQLSTDSIQTSSGGSKDSCNDSSARFSVIKPLHILNNVHQSGVNCLHICCQNLGNNSEYSIISGGDDQALNFLRFVISPVMKQSDIDNMQENDVLLINISEIFRQSGISGDSVCYYPNKSYSIKFLCQRKAVSAHSSAIKGVWTNGIWVFSTGLDQRLRCWKIEKHGNLTEHGHFITSVPEPEALDVRACGRKCYEVVVAGRGMQIVEFSVSYEEDGSG*

Click here to download the sequence:
Link to NCBI Protein BLAST