Transcript Information: R_Transcript_56612.p1


Annotated TAIR IDAT4G08180.1
Annotated Gene NameOSBP(oxysterol binding protein)-related protein 1C
Annotated Gene Symbol(s)ORP1C
Annotation TypeOrtholog
Chromosome Positionchr4:5169727-5173360 | Forward length=814
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 125.554145336606
Replicate 219.998976146524
Replicate 321.961834670311
Condition 2: 8 Hour
Replicate 120.996629192263
Replicate 224.792627741414
Replicate 329.201403585547
Condition 3: 24 Hour
Replicate 127.205001564829
Replicate 221.862275375285
Replicate 324.322711833315


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56612.p1 GENE.R_Transcript_56612~~R_Transcript_56612.p1 ORF type:complete len:800 (+),score=145.53,Oxysterol_BP|PF01237.14|4.9e+03,Oxysterol_BP|PF01237.14|8.2e-125,PH_11|PF15413.2|3.8e+03,PH_11|PF15413.2|1.6e-19,PH_11|PF15413.2|3.1e+03,PH_11|PF15413.2|3.2e+02,PH|PF00169.25|1.1e-11,PH|PF00169.25|1.8e+03,PH|PF00169.25|1.9e+03 R_Transcript_56612:313-2712(+)
ATGCATCCATTTTGTTGCGTATCCCCAATCTCCGATCGCAACAACGACAACCACCACCCTTCCTTCTCTCCAATGCCGTCTCAACAACCGCCTTCCTCGGCGGTTCTCACGGCGGCGCATCCTCACTCCAACGGCGCCCTCCTCGATCCAAAGCACCGCATTAATATTAATAACAATCATAATTTTAATCAAAATCAAAGTCATAATAATCATAATCTGAATCAAGTGACGGCGGTGGATCAGAGAGAAGTGAAGATCAACGACTTAGTAGGGAATGGAATTTGTGGAATTCTATACAAGTGGGTGAATTACGGCAAAGGTTGGAGACCTAGATGGTTCGTTTTACAAGATGGAGTGCTTTCTTATTACAAAATTCACGGTCCTGATAAGATCACCCTTAGTTCTGAGACTGAGAAAGGTTCTAAGGTCATTGGCGATGAATCTATGCGCCGAATTCAGCGCCATAAGAATTCTCTTCCTCAGCTTCGCCGGAAGCCCTTCGGTGAAATTCACCTCAAGGTTTCATCAATCCGTGAGAGCAGATCGGATGACAAGAGATTTTCGATCTTCACGGGCACGAAAAGGCTGCATTTGAGAGCCGAGACTCGGGAGGATCGAGCAGCATGGATGGATGCATTGCAAGCAGTTAAGGACATGTTCCCTAGGATGTCCAACAGCGAGTTAATGGCACCTGTCGACAATGCTGTTGTGTCGACAGAGAAGTTGAGGCAACGGCTTGTAGAAGAGGGCGTCAGCGAAGCAGCTATTCAGGATAGCGAGCAGATCATGAAGACTGAGTTTGCTACCTTGCAAAACCAACTCGTTTTGCTCAAGCAGAAGCAGTGGCTTCTCATTGATACATTGCGTCAGCTTGAGACAGAGAAAGTAGACTTGGAGAACACAGTTGTTGATGAAAGTCAGAAGATGTCAAAAGAAAAAGGGTCTTCCTCAAGAACAAAGCAAGATAAGTCGAGTGAGGCAAGTCCAAGTGAATCAGATGATGAGAATGATAGGGTTGATGCTGCAGAGGAAGACACAGATGAGGATGAAAACACCTTCTTTGATACACGAGATTTTCTCTCATCAAGTTCCTTTAAAAGCAGTGGGTCTGATTTGAGGATATCATCATTCTCCTCTGATGATGATGACCTTCATGCTGCTGAATCTGAAGATGATCTTGATCCTTCCATCAAGTCTGTAGGGGCTAACTTCCCTTACATTAAACGGCGTAAGAAATTGCCTGATCCTAAAGAAAAGGAGAAAGGTGTTAGTCTTTGGTCAATGATAAAAGACAACATCGGAAAAGATCTGACAAAAGTTTGTCTTCCCGTCTATTTCAATGAACCCATCTCTTCTCTTCAAAAGTGCTTTGAAGAATTAGAGTACTCGTATCTCCTTGATAGAGCGAATGAATGGGGTAAACGGGGGAACAGCCTTATGAGAATCCTTAATGTTGCTGCATTTGCTGTTTCTGGGTATGCCTCTACTGAGGGAAGAAGCTGCAAGCCATTTAACCCATTGTTAGGGGAGACATATGAAGCTGAATATCCTGACAAAGGGCTTCGTTTTTTCTCAGAGAAGGTAAGTCATCACCCGATGATTGTTGCCTGTCACTGTGAGGGGACTGGATGGAAATTATGGGGAGACAGCAATCTGAAAAGCAAATTTTGGGGTCGCTCTATACAACTTGATCCTGTTGGGATTCTTACCTTGGAGTTTGATGATGGAGAAGCGTTCCAGTGGAGTAAGGTGACAACATCAATATACAACCTTATATTAGGAAAGTTATATTGTGAGCACTATGGAACAATGCGTATACAAGGAAATCGGGAGTACTCTTGCAAGCTGAAATTTAAAGAGCAGTCTATTATTGACCGAACTCCTCGTCAGGTACAAGGTATTGTGCAAGATAGGAGTGGGAAAACTGTGGCAACATTATTTGGAAAGTGGGATGAAAGCATGCACTATGTGATTGGGGACTGTTTAGGTAAGGGAAAAGGCTCAGATGCTTTGTCAGAAGCACGTCTATTGTGGAGGCGAAGCAAGCCACCAAAGTTCCCTACCAGATACAATTTAACCCGCTTTGCTATCACATTGAATGAGCTAACACCTGGATTACAGGACAAGTTGCCACCTACAGATTCAAGGCTGAGACCTGATCAAAGGTTCCTGGAAAATGGAGAGTACGATAAGGCAAATGCAGAGAAGCTGCGGCTGGAGCAAAGGCAACGGCAGGCTCGGAAAATGCAAGAAAGGGGGTGGAAGCCACAATGGTTTGTAAAGGACAAGGAAACAGATGCATATCAGTACACTGGAGGGTACTGGGAGTCCCGAGAGCAGGGGAAGTGGGAATCATGCCCTGACATCTTTGGGCAAGTCCCAGCCGAGATATTGGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56612.p1 GENE.R_Transcript_56612~~R_Transcript_56612.p1 ORF type:complete len:800 (+),score=145.53,Oxysterol_BP|PF01237.14|4.9e+03,Oxysterol_BP|PF01237.14|8.2e-125,PH_11|PF15413.2|3.8e+03,PH_11|PF15413.2|1.6e-19,PH_11|PF15413.2|3.1e+03,PH_11|PF15413.2|3.2e+02,PH|PF00169.25|1.1e-11,PH|PF00169.25|1.8e+03,PH|PF00169.25|1.9e+03 R_Transcript_56612:313-2712(+)
MHPFCCVSPISDRNNDNHHPSFSPMPSQQPPSSAVLTAAHPHSNGALLDPKHRININNNHNFNQNQSHNNHNLNQVTAVDQREVKINDLVGNGICGILYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKITLSSETEKGSKVIGDESMRRIQRHKNSLPQLRRKPFGEIHLKVSSIRESRSDDKRFSIFTGTKRLHLRAETREDRAAWMDALQAVKDMFPRMSNSELMAPVDNAVVSTEKLRQRLVEEGVSEAAIQDSEQIMKTEFATLQNQLVLLKQKQWLLIDTLRQLETEKVDLENTVVDESQKMSKEKGSSSRTKQDKSSEASPSESDDENDRVDAAEEDTDEDENTFFDTRDFLSSSSFKSSGSDLRISSFSSDDDDLHAAESEDDLDPSIKSVGANFPYIKRRKKLPDPKEKEKGVSLWSMIKDNIGKDLTKVCLPVYFNEPISSLQKCFEELEYSYLLDRANEWGKRGNSLMRILNVAAFAVSGYASTEGRSCKPFNPLLGETYEAEYPDKGLRFFSEKVSHHPMIVACHCEGTGWKLWGDSNLKSKFWGRSIQLDPVGILTLEFDDGEAFQWSKVTTSIYNLILGKLYCEHYGTMRIQGNREYSCKLKFKEQSIIDRTPRQVQGIVQDRSGKTVATLFGKWDESMHYVIGDCLGKGKGSDALSEARLLWRRSKPPKFPTRYNLTRFAITLNELTPGLQDKLPPTDSRLRPDQRFLENGEYDKANAEKLRLEQRQRQARKMQERGWKPQWFVKDKETDAYQYTGGYWESREQGKWESCPDIFGQVPAEILD*

Click here to download the sequence:
Link to NCBI Protein BLAST