Transcript Information: R_Transcript_56613.p1


Annotated TAIR IDAT2G31020.1
Annotated Gene NameOSBP(oxysterol binding protein)-related protein 1A
Annotated Gene Symbol(s)ORP1A
Annotation TypeOrtholog
Chromosome Positionchr2:13201668-13204682 | Forward length=760
E-Value8.4E-119
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.2807308422457
Replicate 24.2256705240348
Replicate 34.6101610256407
Condition 2: 8 Hour
Replicate 13.6959796146785
Replicate 24.5706205021291
Replicate 36.8496643850517
Condition 3: 24 Hour
Replicate 16.8584644233707
Replicate 25.1323558424614
Replicate 35.9193163618653


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56613.p1 GENE.R_Transcript_56613~~R_Transcript_56613.p1 ORF type:complete len:318 (+),score=34.33,PH_11|PF15413.2|1.1e+03,PH_11|PF15413.2|3.1e-20,PH|PF00169.25|2.2e-12,PH|PF00169.25|5.7e+03,PH_8|PF15409.2|2,PH_8|PF15409.2|0.0066,PH_8|PF15409.2|1.2e+04 R_Transcript_56613:313-1266(+)
ATGCATCCATTTTGTTGCGTATCCCCAATCTCCGATCGCAACAACGACAACCACCACCCTTCCTTCTCTCCAATGCCGTCTCAACAACCGCCTTCCTCGGCGGTTCTCACGGCGGCGCATCCTCACTCCAACGGCGCCCTCCTCGATCCAAAGCACCGCATTAATATTAATAACAATCATAATTTTAATCAAAATCAAAGTCATAATAATCATAATCTGAATCAAGTGACGGCGGTGGATCAGAGAGAAGTGAAGATCAACGACTTAGTAGGGAATGGAATTTGTGGAATTCTATACAAGTGGGTGAATTACGGCAAAGGTTGGAGACCTAGATGGTTCGTTTTACAAGATGGAGTGCTTTCTTATTACAAAATTCACGGTCCTGATAAGATCACCCTTAGTTCTGAGACTGAGAAAGGTTCTAAGGTCATTGGCGATGAATCTATGCGCCGAATTCAGCGCCATAAGAATTCTCTTCCTCAGCTTCGCCGGAAGCCCTTCGGTGAAATTCACCTCAAGGTTTCATCAATCCGTGAGAGCAGATCGGATGACAAGAGATTTTCGATCTTCACGGGCACGAAAAGGCTGCATTTGAGAGCCGAGACTCGGGAGGATCGAGCAGCATGGATGGATGCATTGCAAGCAGTTAAGGACATGTTCCCTAGGATGTCCAACAGCGAGTTAATGGCACCTGTCGACAATGCTGTTGTGTCGACAGAGAAGTTGAGGCAACGGCTTGTAGAAGAGGGCGTCAGCGAAGCAGCTATTCAGGATAGCGAGCAGATCATGAAGACTGAGTTTGCTACCTTGCAAAACCAACTCGTTTTGCTCAAGCAGAAGCAGTGGCTTCTCATTGATACATTGCGTCAGCTTGAGGTACATCCAAAGAAAACTAAGAACCACCATTCAAATCGCTTCCATCATTCTTCTTCAGTTTCTCCTGTCCAGGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56613.p1 GENE.R_Transcript_56613~~R_Transcript_56613.p1 ORF type:complete len:318 (+),score=34.33,PH_11|PF15413.2|1.1e+03,PH_11|PF15413.2|3.1e-20,PH|PF00169.25|2.2e-12,PH|PF00169.25|5.7e+03,PH_8|PF15409.2|2,PH_8|PF15409.2|0.0066,PH_8|PF15409.2|1.2e+04 R_Transcript_56613:313-1266(+)
MHPFCCVSPISDRNNDNHHPSFSPMPSQQPPSSAVLTAAHPHSNGALLDPKHRININNNHNFNQNQSHNNHNLNQVTAVDQREVKINDLVGNGICGILYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKITLSSETEKGSKVIGDESMRRIQRHKNSLPQLRRKPFGEIHLKVSSIRESRSDDKRFSIFTGTKRLHLRAETREDRAAWMDALQAVKDMFPRMSNSELMAPVDNAVVSTEKLRQRLVEEGVSEAAIQDSEQIMKTEFATLQNQLVLLKQKQWLLIDTLRQLEVHPKKTKNHHSNRFHHSSSVSPVQE*

Click here to download the sequence:
Link to NCBI Protein BLAST