Transcript Information: R_Transcript_56616.p1


Annotated TAIR IDAT1G08260.1
Annotated Gene NameDNA polymerase epsilon catalytic subunit
Annotated Gene Symbol(s)EMB142, EMB2284, POL2A, TIL1, EMB529, ABO4, ESD7
Annotation TypeOrtholog
Chromosome Positionchr1:2590944-2606892 | Forward length=2161
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.8691988647224
Replicate 25.499287295094
Replicate 36.4340810880018
Condition 2: 8 Hour
Replicate 15.0327175006896
Replicate 25.4670121159639
Replicate 38.3733724030488
Condition 3: 24 Hour
Replicate 110.119792012212
Replicate 28.0940878347787
Replicate 310.545588111575


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56616.p1 GENE.R_Transcript_56616~~R_Transcript_56616.p1 ORF type:complete len:1951 (+),score=390.40,DUF1744|PF08490.8|1e-121,DNA_pol_B_exo1|PF03104.15|5.6e-38,DNA_pol_B_exo1|PF03104.15|3e+03,DNA_pol_B|PF00136.17|3.2e-21,DNA_pol_B|PF00136.17|2.8e+02 R_Transcript_56616:1027-6879(+)
ATGATGATCTCATACATGGTTGATGCACAAGGATATTTGATTATAAACAGAGAGTGTGTAGGCGAAGATATAGAGGATCTGGAATACACTCCAAAGCCAGAATTTGAGGGATATTTCAGAGTTAAAAATGTGAAAAATGAGGTAGAGCTTCTGAGATGCTGGTTTTCTCATATGCAAGAAGTAAAACCTGGCATTTATGTCACGTACAATGGTGATTTCTTTGACTGGCCATTTGTGGAACGAAGAGCAGCCCATTATGGTCTGAAAATGAGTGATGAGATTGGCTTTCAGTGCGACACAGTTCAAGGTGAATGCCGTGCCAAGTTTTCTTGTCATTTGGATTGCTTTGCATGGGTAAAGCGTGACAGTTATCTCCCTCAGGGCAGTCATGGCTTGAAGGCTGTTACCAAGGCCAAATTAGGTTATGACCCACTGGAGGTAAATCCTGAAGACATGGTTCGTTTTGCAAAAGAAAAGCCTCAGATGATGGCCTCTTATTCTGTTTCTGATGCTGTTGCAACTTATTACTTGTACATGACCTATGTTCATCCTTTCATATTCTCCCTTGCTACTATAATACCCATGCCACCAGATGAGGTTTTGCGGAAAGGAAGTGGAACTCTATGTGAAATGCTTCTTATGGTCCAGGCATTCAAGGCAAATGTTGTCTGTCCTAACAAACACCAGTCTGAATCGGAAAAGTTCTACAACAATAAACTTTTGGAGAGTGAGACCTACATTGGTGGTCATGTGGAATGCCTTGAAAGTGGTGTTTTTAGATCTGATCTTCCTACTAGTTTTAAACTTGAACCATCTGGTTATCAGCAACTGGTTGACAATCTTGATCGTGATCTGCAATATGCTATTAAAGTGGAGGGTAAAATGGACTTGGATTCAATCTCAAATTATGATGAAATCAAGGCCGCTATCAAAGAAAAGCTTGTTTCCTTACGAGATGAACCTGTGCGTGATGAATGTCCCCTCATATACCATTTGGATGTGGCTGCTATGTATCCGAATATTATCCTGACAAACAGGCTTCAGCCCCCATCAATTGTTACAGATGAGGACTGCACTGCATGTGATTTTAATCGACCTGGAAAAACTTGTCTTCGGAAACTTGAATGGGTTTGGCGTGGAGAAACATACATGGCAAAGAAAAGTGACTATTACCATTTGAAGAGGCAAATTGAATCTGAGATGGTAGATAGCATTGAGGGCCAATCATCTAAATCATTTCTTGAACTCCCCAAGGCAGAGCAACAATCAAAGTTAAAGGAACGTCTTCGAAAATATTGTCAGAAGGCATATAAACGGGTTCTTGACAAGCCAGCAACTCAGCTTCGTGAAGCCGGAATCTGCATGAGGGAAAATCCATTCTATGTTGATACTGTCCGTAGCTTTCGAGATAGAAGGTATGAATATAAAGGGCTCAATAAAGTCTGGAAGGCAAAGTTATCTGAAGCAAAAGCAAGTGGAAATTCCATCAAGATCCAGGAAGCTCAGGATATGGTTGTCGTGTATGATTCACTGCAGCTTGCTCATAAATGTATTCTCAATTCCTTCTATGGATATGTGATGCGCAAGGGTGCAAGGTGGTACTCCATGGAAATGGCTGGGGTTGTCACCTATACAGGAGCCAAAATCATCCAAAATGCTCGTGTATTGGTTGAGAAGATTGGTCGACCACTTGAGTTAGATACAGATGGAATCTGGTGTGCACTACCTGGATCATTCCCAGAGAACTTTACCTTTAAAACAAAAGACTCAAAGAAGCTGACAATCTCTTATCCTTGTGTTATGCTTAATGTGGATGTAGCAAAAAATAATACAAATGATCAATACCAGACACTGAAAGATCCTGTTAATAGAATATACGCAACACATAGCGAATGCTCAATTGAATTTGAAGTCGATGGTCCTTACAAGGCGATGATTCTTCCAGCATCAAAAGAAGAAGGTATACTCATCAAGAAACGTTATGCAGTTTTTAATGATGATGGAACACTGGCAGAACTTAAAGGTTTTGAGATAAAGCGCAGAGGTGAGCTTAAGCTCATAAAAGTTTTCCAGGCTGAGCTGTTTGACAAATTTCTACATGGGTCGACCTTGGAAGAATGCTACGCTGCTGTTGCTAATGTTGCGAACCGCTGGCTTGATCTTCTTGAGAATCGAGGGAAAGATATAGCTGATAGTGAACTGCTGGATTACATTTCTGAGTCAAGCACCATGAGCAAATCTTTAGCAGACTATGGTGAACAGAAGTCTTGTGCAGTGACTACTGCTAGGCGCCTGGCTGATTTTCTTGGAGATACTATGGTTAAAGATAAAGGCCTGTTGTGTCAGTATATTGTTGCTTGCGAGCCAAAGGGAACACCAGTAAGCGAGCGAGCTCTTCCGGTTGCAATATTTGAGACTGAAAATGAAATTATGAAATTCTATGTGCGGAAGTGGTGCAAGATTTCATCAGATGTTGGGATTAGATCCATCATTGATTGGTCTTATTACAAGCAGCGGCTGAGTTCAGCTATTCAGAAAATTATCACCATCCCTGCTGCAATGCAAAAGGTTGCAAATCCTGTACCCAGGGTGGTTCATCCTGACTGGTTGCACAAGAAGGTTCGGGAGAAGGAGGACAAATTTCGTCAGAGGAAGATAAAGGATATATTCAGCTCTTCAAAGCGAGATGAGACAGTCAAGATTGATGATGCCAATGCCTCTCCTGATAATGGGTTAGATAATCACAAAGTTCAAGATTTAGAGGATATTGGTAAATTGGATGGACATGGAGTTGGCCATAGAGCTGTGGTTCATAGTTATGAAGTTAATGGCAGAGATTCATTGCAGAGAACCACCTTGCACCACCAAAGTAATCAGCCAAGAATGGATCCTCAGAGTATTAGCTGTATCGAAGAAGTAGATAGGAGTGTAGACTATCAGGGATGGCTTGCGCAGAAGAAACGGAAGTGGAAGGAAAACCGAGAGAAAAGGAAGAGACAAAGGTTGTGCAATGGAAAAACATCAAAGCATGCTGCTGCCAATTCCGAGCTGCATGAAAACTCTATAATTCAGAAAAGAAGTCTGGGAAGAACTGGAGTTAGTTCATACTTCAAGAGGCAAGATTTGTCCCTCACAAACTGCTATTGGCAGATTTTGCAGCTGGTGCCAAGTGATAAGCCCGGTCAATTCTTTGCTTGGGTAATTGTGGAAGGAAGCATGCTTAAAATTCCCATCAGTGTTCCTAGAGTGTTCTATCTTAACTCCAAAGCTCCAATAACAGAAGAATTTCCTGGAAGACGTGTTAACAAGATTCTTCCTCATGGACACCACAGCTGTTCCCTGATTGAGATAACCATTGATGAGGAAGAGTTCAGAGCAGAAAGAAGGAGACTTGCAGCTCATCTTGCAGATCCAGAAATTGAGGGAATATACGAAACGAAGTTGCCACCAGAATTTAATGCTATCCTCCAGATTGGATGTGTGTGTAAAGTAGATAAAAAAGCCAATAAACGAAATCTTCAATCTGCTTGGAGCGTGAATGAATTACATATGAAGACTACAACAGAATGTCAGTATCTGGAGCTGTCCCTCTCTTTCTTTTACTTATACCACAGCTGCTGTGAAGGACGAGCGGTATATGGAGGATTTTTCCCTTTATCTAATTTGATATATTTTGTTGCGGTTGATCCTCACCAGAACAAAGGGCTGAATCCTACTACCATTAAAAGATTTTATTCTGAAGCCTGCCAAGCATTATCTATAGAACCTCCTCTCCCTCAAGGGATTATCACATACAAGGTGGATTATGTTCTGCAATATGATGAGGCTGAAAGGATTATGCAGAGAACTATAACTGAGCACAGAGCACACAATAACAGACCCGGGCTTGCTGTAATCGAGTGCCCAAATGTTCAGCGTCTAAAGTCGGGTATACAAGCATTACATGATCTTCCATGCGTAAGCATCCCTGCTAATGCTCGTGATAGTCACTATCAGGCTATTGGCTGGCAAACTGTGGCTGCGAAAATTGCATTGCAGAGATGTGCTGCATCATCCCAGTGGCTGCAAGAGAGAATCTCTCTGTCTAGATATGCCCATGTACCCCTGGGGAACCTTGAACTAGATTGGCTTATACACACTATTGATGTCTTTTTTTCAAGAGCATTACGTGAGAAGCAACAGGTACTTTGGGTTTCTGATGATGGTGTTCCAGATTTGGGCGGCTCTGGTGAAGATGATGCCTGCTTTGTTGATGAGGTCAACCAGCCAGTTCTTGTTTACCCTGGAGCATATAGAAAGGTTTCTGTTGAGTTAAAGATTCATCACTTGGCTGTTAATGCTCTTCTGAAAAGCAGTCATATTAATGAAATTGAGGGCAGCAGTTTATTTGGATTTGAGCAAGATATGGAATCTGATGCTGCGTGCAGTGAACAATATGGTTTTGATGAGGCTACCTCCTGTGGGCCTGCTTTCCGAGTCCTGAAACAGCTAGTACAAAGATGCCTTCAAGATGCAGTTACATCAGGAAATGTTTTTGCCGATGCAATATTACAACATCTTTATCGCTGGCTTTGCAGCCCACAATCAAAGCTTCATGATCCTGCTCTTCATAGAATGCTTTGCAAGGTAATGCAAAAGGTGTTTGCATTACTGTTGGCAGAGTTCCGCAAGTTGGGTGCCACAGTCATTTTTGCAAACTTTTCAAAAATAATTTTAGACACTGGAAAGGCAGATTTATCTTCAGCGAGAGCTTATTGTGATAGCTTGCTTAAAGCAATACAGACAAGGGACTTGTTTGAATGGATCGAGATCGAGCCACTACACTTCTGGCACTCCTTGCTCTTTATGGATCAGTACAATTATGGCGGGATCCAGGAGAAAGACCGTGAAGCACCCACCAGCAGTTCTGCATTTTCTAGTGGAAGTTCACATGATGATCTTCAAGTGGACATTGTGTCAAGTTGGAATATTGCAGACCACTTACCCAAGGCTACTCAAGATCATTTTGTTGTGATTGTCTCTGAGTTTATGTACAAGCCATGGGAGTATGCTCTGAATCATGCCACCAAAGAAACTATTCTAGGAGATGGCAACTTATGCACACCATCAATCACAGCTCCCATAGCTGAAAAGTTGGAGTCACATATGATTGAATATCTCAAAGATCAGATCAGCTCTTACTTTACGGATAAACTTCTTGTCATTGTTCGCGAAATATTACATAATTCAAAAGGAACGAAGAGGCCCCACTATGATGACGAATTGTCACAACAAATAGATCCTCAGCTTGCTGGCATTGTCCATACTGGGGATGCGGCATTAGAGTTTATTAAACATGTCTGTGCTGTTTTGGCTTTGGACCAAAATATTCAGCACGATGTGCTGGTCATGAGAAGGAATGTGTTAAGATACATACGTGTGCGGGAGTTTGCTCCAGAAGCCGAATTTTCTGCTTCCTTACCATCCTTCACTCTACCAAACATCATTTGCAGCTATTGCAATGATGTGCGAGACCTAGACTTGGGACGGGATCCATCATTACTTGCACAGGAGTGGCGATGTGCAGTGCCACAATGTGGGCATCCTTATGATAGAGAGATGATGGAGAACTCTCTTCTTCAGATTGTACGGCAAAGGGAACGTCTTTACCATTTGCAGGACTTGGTGTGTGTAAAGTGCCATATGATGAAGGATCGTCACTTGACCGAGCAGTGTACCTGTGCCGGTCCATTTAAGTGCCTTGAAGATGCTTCTGAGTTCCGCAGAAAAATGCAAATTTTTCATAAAATTGCAGTTCAACAGAATTTTGAATTGTTGAAAGAATGCGTCTCTTGGATTCTGGAAATCAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56616.p1 GENE.R_Transcript_56616~~R_Transcript_56616.p1 ORF type:complete len:1951 (+),score=390.40,DUF1744|PF08490.8|1e-121,DNA_pol_B_exo1|PF03104.15|5.6e-38,DNA_pol_B_exo1|PF03104.15|3e+03,DNA_pol_B|PF00136.17|3.2e-21,DNA_pol_B|PF00136.17|2.8e+02 R_Transcript_56616:1027-6879(+)
MMISYMVDAQGYLIINRECVGEDIEDLEYTPKPEFEGYFRVKNVKNEVELLRCWFSHMQEVKPGIYVTYNGDFFDWPFVERRAAHYGLKMSDEIGFQCDTVQGECRAKFSCHLDCFAWVKRDSYLPQGSHGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMPPDEVLRKGSGTLCEMLLMVQAFKANVVCPNKHQSESEKFYNNKLLESETYIGGHVECLESGVFRSDLPTSFKLEPSGYQQLVDNLDRDLQYAIKVEGKMDLDSISNYDEIKAAIKEKLVSLRDEPVRDECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEDCTACDFNRPGKTCLRKLEWVWRGETYMAKKSDYYHLKRQIESEMVDSIEGQSSKSFLELPKAEQQSKLKERLRKYCQKAYKRVLDKPATQLREAGICMRENPFYVDTVRSFRDRRYEYKGLNKVWKAKLSEAKASGNSIKIQEAQDMVVVYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARVLVEKIGRPLELDTDGIWCALPGSFPENFTFKTKDSKKLTISYPCVMLNVDVAKNNTNDQYQTLKDPVNRIYATHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTLEECYAAVANVANRWLDLLENRGKDIADSELLDYISESSTMSKSLADYGEQKSCAVTTARRLADFLGDTMVKDKGLLCQYIVACEPKGTPVSERALPVAIFETENEIMKFYVRKWCKISSDVGIRSIIDWSYYKQRLSSAIQKIITIPAAMQKVANPVPRVVHPDWLHKKVREKEDKFRQRKIKDIFSSSKRDETVKIDDANASPDNGLDNHKVQDLEDIGKLDGHGVGHRAVVHSYEVNGRDSLQRTTLHHQSNQPRMDPQSISCIEEVDRSVDYQGWLAQKKRKWKENREKRKRQRLCNGKTSKHAAANSELHENSIIQKRSLGRTGVSSYFKRQDLSLTNCYWQILQLVPSDKPGQFFAWVIVEGSMLKIPISVPRVFYLNSKAPITEEFPGRRVNKILPHGHHSCSLIEITIDEEEFRAERRRLAAHLADPEIEGIYETKLPPEFNAILQIGCVCKVDKKANKRNLQSAWSVNELHMKTTTECQYLELSLSFFYLYHSCCEGRAVYGGFFPLSNLIYFVAVDPHQNKGLNPTTIKRFYSEACQALSIEPPLPQGIITYKVDYVLQYDEAERIMQRTITEHRAHNNRPGLAVIECPNVQRLKSGIQALHDLPCVSIPANARDSHYQAIGWQTVAAKIALQRCAASSQWLQERISLSRYAHVPLGNLELDWLIHTIDVFFSRALREKQQVLWVSDDGVPDLGGSGEDDACFVDEVNQPVLVYPGAYRKVSVELKIHHLAVNALLKSSHINEIEGSSLFGFEQDMESDAACSEQYGFDEATSCGPAFRVLKQLVQRCLQDAVTSGNVFADAILQHLYRWLCSPQSKLHDPALHRMLCKVMQKVFALLLAEFRKLGATVIFANFSKIILDTGKADLSSARAYCDSLLKAIQTRDLFEWIEIEPLHFWHSLLFMDQYNYGGIQEKDREAPTSSSAFSSGSSHDDLQVDIVSSWNIADHLPKATQDHFVVIVSEFMYKPWEYALNHATKETILGDGNLCTPSITAPIAEKLESHMIEYLKDQISSYFTDKLLVIVREILHNSKGTKRPHYDDELSQQIDPQLAGIVHTGDAALEFIKHVCAVLALDQNIQHDVLVMRRNVLRYIRVREFAPEAEFSASLPSFTLPNIICSYCNDVRDLDLGRDPSLLAQEWRCAVPQCGHPYDREMMENSLLQIVRQRERLYHLQDLVCVKCHMMKDRHLTEQCTCAGPFKCLEDASEFRRKMQIFHKIAVQQNFELLKECVSWILEIR*

Click here to download the sequence:
Link to NCBI Protein BLAST