Transcript Information: R_Transcript_56628.p1


Annotated TAIR IDAT2G18540.1
Annotated Gene NameRmlC-like cupins superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:8042382-8045008 | Reverse length=707
E-Value5E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.4705355119421
Replicate 22.8569746021004
Replicate 34.0439460506991
Condition 2: 8 Hour
Replicate 14.0929451671348
Replicate 24.6820145556031
Replicate 36.8880305404049
Condition 3: 24 Hour
Replicate 15.8034105074138
Replicate 24.6180219495226
Replicate 36.4315190898156


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56628.p1 GENE.R_Transcript_56628~~R_Transcript_56628.p1 ORF type:complete len:1705 (+),score=442.58,SCAPER_N|PF16501.1|7.1e-16 R_Transcript_56628:471-5585(+)
ATGGACAACTCTGGAACAGCAGCCGGGGATGATCAGGGCTCAGGATGGTTCGAAGTTAAAAAGAAGCATAGAACCAGCTCAAAATTCTCTATTCAAAACTGGGTTGGGGGTTCTTCAAGGCAGCAGTTGAATGGTAAAGGTCGGAATGCCAATGACAAGCAACGTTCCAATCTTCCAAGAGCAGGAAGAGAATTTTTTCTGAGAGGTGTTGCAGGGAATTCTTCTTCCACAAAGGACAACAAGAAGGATGAGAAGGACGAGGGTTGCCAGGATAAGCATGCAGTTGATGACTGTAATGGTCATTTGGAGACACCATCAGTGAAAGTTATATTGACCACTACTTCCAGAAGTGCTATCACAGATGGTGAAATTGTCTCTAAAAAGAAGTCTGACATGGTTCAAAAAATTAAATGGGGTGACTTAGAGGATGAAGTGCTCCCCTCAGATCATGGAAGCTCTGCTGTTGGAATAAGGTTTGGTGAAATTGGAGATGATGATTTGGCACTGTGTGGTACATCCAGGGCTCTGTATGATTTGGGTTCTTGTATCTCATCTCAGGATGATCCAGTAGTTAACAAAAATGTCATGGAAGTAGTTGATGTTGCTTGTGATACATGCCATAAGAGTTCACAATCTCCTATCGAGGGATCCAGTGAGGAAAACTGTAAAGAGGTAAATGAAGTAGCTTCAAGTGATGTGGAGATAACGTCAACGATTAGCAAAACAGTTGATGCAAAATGCAGTGTTCTCGATCACAAGGAGTTTGCTGTCACTGATGTTGAGCCTTTGAAGGAGTCTCTATGCGCTAATGAACTATGTGGTGATGAGTTCCAGAGTTCAACTGCTGAGGAATTTGCAAAAGCAGGTGAGTTGCAGGAACCCAATCTCACAACTGATGCTGGTGACATCAGTTTATCTTCGGGAAGAGCTGATGATGTTGATTCTAGTACAGTGGTGATTGCTCAAGATCCAGATCTTGCTTCATCAGCACAGGGGCAATCTAAAATTTCTGAGAACTCCAACATAGGGACTGTTGTTGGTGACTCTGGAGGCTTACCTGGGGCTGGGATTACATCTGCAGATAATATATCAAATGCACCGATCATGAGTGCTCTTGGAGAACCAGAAGAAGGTGAAAGCAAGGAAAGATTTAGGGAGCGGCTCTGGTGTTTCCTGTTTGAGAACCTCAACAGGGCTATAGATGAACTCTACCTTCTTTGTGAGCTAGAATGTGACTTGGAGCAGGTTAAAGAGGCAATGCTTGTTCTCCAGGAAGCTGAGTCTGATTTCAGTGAACTCAACTTGAGGTTGGAGGAGTTTGAAAAAATGAAGAAGGCATCCCAATCACCAAGCGTGGTGATGACTATGAAAGGCGACCACAGAAGGCCTCATGCTCTATCATGGGAGGTACGTAGAATGACTACTTCACCCCACAGAGCAGAAGTATTGTCCTCTTCACTTGAGGCATTTAAGAAAATTCAAGAAGAGAGGACAAAAGGGCGCACAGCTGGAGATACCAGTTCTGTAGTTCCTAAACGCCCGAGTCGGCTAGTAGCAGATGCTCAGAAGAAGTCCATATTCCCTACATCAGAACCTGAAACCAAGTCAAGAAGGCAGAGTGGTATTTCAGGTCCTGTTCCTGTGAACACAAGCAGAGATCGGAGAAGCACAGAGTCAGGAAGATCTAGCAAAATAAGCTTGGTACAAACAAGCCGTGTCCCTTCAATTTCTTTATCTGCTTCTGATCCCAACTCAATTAAACTACCACCAAAAGGCCATACTGCTGCCTATGCAGGTGGAAAAGGCAAGAAAGATCAGCTAGGATCCTCAGGTGAGGTGGAGAAGCTCCCCACTTCTGGTGAGCTGTTCAGAAGACATAGTACTTCCAGCGATAAAGAGAAGGAGAAGGAAAAGAGAAATTCAATGTCATGGAAACCGTCGGATGCTTGGAAGGAAAAGAGAAATTGGGAGGAAATACTTGCTCCTCCTGGTCGTCTTTCTTCTCGTATGTTACATTCACCTTGCATGACCAGAAAAAGTGCTGAGCGTGCACGGATTTTGCATGATAAACTAATGTCCCCTGAGAAGAGAAAGAAGACTGCTGTGGATTTGAAAAAAGAGGCAGAAGAGAAGCATGCGCGTGCTATGAGAATTAGGAACGAGTTGGAGAATGAGAGAGTCCAAAAGCTCCAACGTACATCTGAGAAATTGAACCGTGTGAGTGAGTGGCAGGCTGTCCGCAGTATGAAATTACGGGAGGGCATGAATGCTCGTCATCAACGTAGTGAATCTCGTTATGAAGCTTACATAGCTCAGGTTGTGAAGAGAGCTGGAGATGAAAGTATCAAAGTGAATGAGGTCCGCTTTATTACTTCCTTGAATGATGAAAACAAGAAGTTTTTGTTGCGTCAGAAGCTTCATGATTCAGAGTTGAGGAGGGCTGAAAAGTTTCAAGTAATGAAAACAAAACAGAAAGAAGATATGCTCAGAGAGGAAGCTGTCATGGAACGCAGGAAACTCAAAGAAGCTGAGAAGTTACAGCGCCTTGCTGAAAATCAACGGAAAAAGGAAGAGGCTCAGCTTAGAAGGGAAGAAGAAAGGAAGGCATCGAGTGCAGCAAGGGAGGCAAGAGCCATGGAGCAACTTCGAAGGAAGGAAGAAAGGGTCAAAGCACAACAAGAAGAAGCAGAATTACTTGCACAAAGATTAGCTGAAAGGCTTAGTGAAAGTGAACAACGCCGCAAGCTTTACATCGAGCAGATACGGGAGAGAGCGTCAATGGATTTTAGAGATCAATCATCGCCTCTGGTTCGCCGTTCGCTGAATAGGGAGGGCCAAGGAAGATCGACACCACCTGGTAATGCTGATGATAATCAACCAAACAATTCCTCAGGTGCTGGGGATTCTAATCCTGGAAACAACAATGCTGCTATGCAGCAGTCTTTGAAGCGAAGGATAAAGAAAATCAGACAGAAGTTAATGGCTTTGAAGCATGAATTTCCTGAAACTATGGCTGCTGAAAACATTGGCATTGGATATAGAACAACCATGGCAACTGCTAGGGCTAAAGTTGGGAAATGGCTCCAAGATTTGCAGAGACTTCGGCAGGAAAGGAAGGAAGGGGCTGCAAGTATTGGTCTAATAGCTTCAGAAATGATTAAGTTCTTGGACGGAAAGGAGCTGGAATTACAAGCTGCTTGTCAGGCTGGTTTGCTTGATTTCATCTCTTCTGCGCTGCCTGCTTCTCACATATCGAAGCCTGAAGCTTGCCAAGTGACCATATACCTCCTGAGACTCTTAAAAGTGGTACTACTTATGCCTGCAAATAGAAGACATTTTCTTGCTCAGAATCTCTTACCCCCTCTTATTCCAATGCTATTAGCCGCTCTTGAAAGTTACATTAGAATGGCAGCATCTATAAATGTTCCTGGTAGCTCAAATTTACAGACAAGCAAAACTTCATATGAAAATTTCAATTCAATCTCTGAAGTACTAGATGGTTTCTTGTGGACTGTGACAATGATTATTGGCCTTCCTACCTTAGACGAACGCCAACTTCGGATGCAGGATGGCCTACTTGAACTTGTTGTTTCATATCAAATCATCCACCGCCTTCGAGATCTTTTTGCACTGTATGACAGACCTCATGTGGAAGGATCTCCATTTCCATCATCGATACGGCTGAGCATAAATCTATTGGTGGTTTTGACATCTAGACCATGTACTGTTTCTTCAATTGACTGGGAATGTATGCCAGAGTTGGCGACACTAGACAATAAAGCAGAAGTATCTAATCTCATGGAGAATTCTGATTCTGTTTATCCACTTGTGCACAATTCCCAGAAGCAGCCACAGCTACCACTATCAGATGTAAATTGTGATTCATCTGGAGTTTCTGGTGTACAAATTGAAGATCAGTTTGGAGAATCACACCAAAAAAAGCTACTGGATGGTTCTATATCCTCTGGAGTACAGGGTGAAAAGGAGCATATTCGTATTGAGTTAAATAGCAATGACACGGGAACAGAAAATGAACATAATGACTCACAGAAAGATTTGGGTTTGAGCATTCCCAAGTCTAACATTCCTCAGAAGGATGAGAAAAACAACTTAGATAATAATATAGTTAAGAAGGATGAACAACATATGAATTTAAAACAGCCTCATGCATTTCTCCTATCTGCCATTGCTGAGACTGGTTTAGTCAGTCTGCCATCTTTGGTGACAGCTGCGCTATTGCAGGCAAACAATAAGTTGTCTTCTGAACAGGGATTATATGTCCTCCCATCAAATTTTGAGGAAGTAGCAACTGGCGTATTGAAAGTATTGAACAATCTAGCTCTGATGGACATTACTTTCATGCAGCAGATGCTAGCCAGGCCAGATCTGAAAATGGAGTTTTTCCACATCATGAGTTTCCTTCTGACCCACTGCACCAATAATTGGAAAGTAGCAAATGATCAGGTTGGTTCACTTCTGCTTGAATCATTGTTGCTTCTTGGCTACTTTTCCTTGTTTCATCCTGGAAATCAAGCAGTCCTCCGATGGGGCAACAGTCCGACCATCCTTCATAAGGTCTGTGATTTACCATTCGCATTTTTTAGCGACTCGGAATTGATGCCAATCTTGGCTGGAACCCTTGTGGCTGCATGCTTTGGGTGTGAACAGAACAAAGGTGTGGTCCAACAGGAACTCAGTACAGAAATGATTCTTTCGCTGGTGAAGTCATGCAGAAGTGGTATATGTACAGCTCGGTCCAGGTCCCCATTAGGTAATCCATCTGTTGAAGATTCAACAGAAAGTACATCGGTAACCATTGAGCTTGGGAAATTGCAAAACGACGTGTTAGTAAAATCAACTCGGTCATCAATTGCAAAAAGCTCCCGCCTTGCTCTATCCAAGGGTGCTCTGTTGGGAAGCAATGGCAATAGGATTGGTAAGATGAGAAACTGTAGGGACAGCAAAACAAGCAAAACTTTAGAAGAGACGATTTCAAAGCAGAAAATGGCAGCGTCACAAGCTCCTGCAACTCTGCCTTTGTACGCTAGGTTCCCAGGAAGCTTTGTCGATAGAGCAGAGGGGTTCTTTTCCCTCGAGCCTAGCAGCCCTGGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56628.p1 GENE.R_Transcript_56628~~R_Transcript_56628.p1 ORF type:complete len:1705 (+),score=442.58,SCAPER_N|PF16501.1|7.1e-16 R_Transcript_56628:471-5585(+)
MDNSGTAAGDDQGSGWFEVKKKHRTSSKFSIQNWVGGSSRQQLNGKGRNANDKQRSNLPRAGREFFLRGVAGNSSSTKDNKKDEKDEGCQDKHAVDDCNGHLETPSVKVILTTTSRSAITDGEIVSKKKSDMVQKIKWGDLEDEVLPSDHGSSAVGIRFGEIGDDDLALCGTSRALYDLGSCISSQDDPVVNKNVMEVVDVACDTCHKSSQSPIEGSSEENCKEVNEVASSDVEITSTISKTVDAKCSVLDHKEFAVTDVEPLKESLCANELCGDEFQSSTAEEFAKAGELQEPNLTTDAGDISLSSGRADDVDSSTVVIAQDPDLASSAQGQSKISENSNIGTVVGDSGGLPGAGITSADNISNAPIMSALGEPEEGESKERFRERLWCFLFENLNRAIDELYLLCELECDLEQVKEAMLVLQEAESDFSELNLRLEEFEKMKKASQSPSVVMTMKGDHRRPHALSWEVRRMTTSPHRAEVLSSSLEAFKKIQEERTKGRTAGDTSSVVPKRPSRLVADAQKKSIFPTSEPETKSRRQSGISGPVPVNTSRDRRSTESGRSSKISLVQTSRVPSISLSASDPNSIKLPPKGHTAAYAGGKGKKDQLGSSGEVEKLPTSGELFRRHSTSSDKEKEKEKRNSMSWKPSDAWKEKRNWEEILAPPGRLSSRMLHSPCMTRKSAERARILHDKLMSPEKRKKTAVDLKKEAEEKHARAMRIRNELENERVQKLQRTSEKLNRVSEWQAVRSMKLREGMNARHQRSESRYEAYIAQVVKRAGDESIKVNEVRFITSLNDENKKFLLRQKLHDSELRRAEKFQVMKTKQKEDMLREEAVMERRKLKEAEKLQRLAENQRKKEEAQLRREEERKASSAAREARAMEQLRRKEERVKAQQEEAELLAQRLAERLSESEQRRKLYIEQIRERASMDFRDQSSPLVRRSLNREGQGRSTPPGNADDNQPNNSSGAGDSNPGNNNAAMQQSLKRRIKKIRQKLMALKHEFPETMAAENIGIGYRTTMATARAKVGKWLQDLQRLRQERKEGAASIGLIASEMIKFLDGKELELQAACQAGLLDFISSALPASHISKPEACQVTIYLLRLLKVVLLMPANRRHFLAQNLLPPLIPMLLAALESYIRMAASINVPGSSNLQTSKTSYENFNSISEVLDGFLWTVTMIIGLPTLDERQLRMQDGLLELVVSYQIIHRLRDLFALYDRPHVEGSPFPSSIRLSINLLVVLTSRPCTVSSIDWECMPELATLDNKAEVSNLMENSDSVYPLVHNSQKQPQLPLSDVNCDSSGVSGVQIEDQFGESHQKKLLDGSISSGVQGEKEHIRIELNSNDTGTENEHNDSQKDLGLSIPKSNIPQKDEKNNLDNNIVKKDEQHMNLKQPHAFLLSAIAETGLVSLPSLVTAALLQANNKLSSEQGLYVLPSNFEEVATGVLKVLNNLALMDITFMQQMLARPDLKMEFFHIMSFLLTHCTNNWKVANDQVGSLLLESLLLLGYFSLFHPGNQAVLRWGNSPTILHKVCDLPFAFFSDSELMPILAGTLVAACFGCEQNKGVVQQELSTEMILSLVKSCRSGICTARSRSPLGNPSVEDSTESTSVTIELGKLQNDVLVKSTRSSIAKSSRLALSKGALLGSNGNRIGKMRNCRDSKTSKTLEETISKQKMAASQAPATLPLYARFPGSFVDRAEGFFSLEPSSPG*

Click here to download the sequence:
Link to NCBI Protein BLAST