Transcript Information: R_Transcript_56665.p1


Annotated TAIR IDAT4G38640.1
Annotated Gene NamePlasma-membrane choline transporter family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:18059884-18062091 | Reverse length=556
E-Value1.3E-253
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 140.058730380981
Replicate 230.482128997233
Replicate 335.750872605424
Condition 2: 8 Hour
Replicate 124.573314464914
Replicate 232.942370569604
Replicate 337.048733819826
Condition 3: 24 Hour
Replicate 131.403000600752
Replicate 227.411536049718
Replicate 330.251934692247


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56665.p1 GENE.R_Transcript_56665~~R_Transcript_56665.p1 ORF type:complete len:560 (+),score=68.47,Choline_transpo|PF04515.8|8.5e+03,Choline_transpo|PF04515.8|1.2e+04,Choline_transpo|PF04515.8|5.5e-57 R_Transcript_56665:215-1894(+)
ATGGCAGGCAGTGAAGAACCCAACAAACCCTCCAATCTATATGACCCTCCATCTTCACCTACTCAGCCTCTCCTTTCCAAACCCTACCCTTCTCCTTCCATTGAAGAACACCAACCATCTTTTATTTCTTCTACTTCTCAATCTGAACAAACTGACCGCACCCAGTTCCTTCAAATCTCTTACAATTATGGCCCTAGACCTTTCAAAGACTTAACCTTTCTTATCCTTTTTATCCTTTTGTCTTTATCCACTTTTGCCTTTGGTATTTTCTCCATTGCCCATCACAATTCTCACCACTCTTCAATCTCTTCTTTCTCTTATGACCCCACTTCCTCTTCTTGTATCCAAAAAACAACACTTCCCCATGATGGATCTTTCTCAATTTTCCTTTCTGGGTTTTCCAATTTTGTGTCTGCTAATGATGAAAGTTCAGGTTTTGTTAGGGGTTTGATTTGGGTTCTTGTGATTACCTTCATTTTGAGCTTGCCCCTTATCTGGGTTTTGTTGTTGTTGCTTAAACATTTCACTAAGCATCTTGTTTATGCTTCACTGCCTTTCTTTATTTTGATTCCTGTGGGAGTAAATGTGTATTGGTTTGTTGCTTGCACTGTTAGTTCCTCTTGTAGTGATGCTTTGCCCCTTGCTTATAGGATACTTTTGTTGCTCTTCGTTTTCTTGGTTGTTGGGATTATTGTGTGGATATTTGTGCTCAATTGGCATCGAGTTGAGTTGACTATAAATATAGTTGGGGTGGCTGCGAATGCCCTCTCGAGGAATTTGGGTTTGTTTGGGGTTGTCCCTTGTTTGAAGTTGGGGTTGTTGGTTTATTATGTGCCTATTGTTGTGTTCTTGGTGTTTGCAAGGTGGAATGGGAAGATTGTTCCAAAAGAATCGAGGGGAGAGTATTCTTGTGGTTGGAAGCAAGATGGGTGGGTTCCTGCTTATTATGCATTGGCTATTCTTACTATGTTGTGGTCCGCGACCGTGATGGTGGAGACTAAAGCTTATGTGATTAGTGCCACTATTTCTCAGTGGTATTTCGCTAAGGATGATTCGACCCCAAAAAGGAAGATCAGAAGCTCTTTGAGGAATGCTTTTGGGCCCTCAGCCGGAACTATATGCTTCTCTGGACTACTAATTTGTGTTGTCCGCATGGTACGTGCCGCTGTAGATAGTGCAAGACGAGAAGGTGCTACTGGAATAGTGAATGTTGTCCTACGGTGTTGTGTTAATTTATTGCTGGTGGCTGTAGATTTTTTGAACAAATTCACAGTCAACTTTGCAGCTATCACAGGCGAAGCTTATTGTACATCTGCAAGGATGACATACGAACTTCTGAAACGTAATCTTCTGTCGCCCGTTTTTGTGGAGACCATATCTACACGTTTACTGGGTGGAATCATCTTTGTCCTTTCGGCAATATACGCAGTTGTGGTCTGTGCCATCCTAAATGGCGCAACTAATCTTGGGGTGTACTCCTATTATGTCTCCCTCTTGGCATGGGCGTTGCTTATGTTGGTGCTTGGTCTCTTTGTGCATTTGCTGGAAAACGTCATTGACACAATTTATGTGTGCTATGCCATCGACCGAGACCGAGCAGAGGTTTGTAAACCAGAGGTTCATGATGTTTATGTTCAGCTTCCTATTACAAGGAGCCACCGGACTCCACTCAATGTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56665.p1 GENE.R_Transcript_56665~~R_Transcript_56665.p1 ORF type:complete len:560 (+),score=68.47,Choline_transpo|PF04515.8|8.5e+03,Choline_transpo|PF04515.8|1.2e+04,Choline_transpo|PF04515.8|5.5e-57 R_Transcript_56665:215-1894(+)
MAGSEEPNKPSNLYDPPSSPTQPLLSKPYPSPSIEEHQPSFISSTSQSEQTDRTQFLQISYNYGPRPFKDLTFLILFILLSLSTFAFGIFSIAHHNSHHSSISSFSYDPTSSSCIQKTTLPHDGSFSIFLSGFSNFVSANDESSGFVRGLIWVLVITFILSLPLIWVLLLLLKHFTKHLVYASLPFFILIPVGVNVYWFVACTVSSSCSDALPLAYRILLLLFVFLVVGIIVWIFVLNWHRVELTINIVGVAANALSRNLGLFGVVPCLKLGLLVYYVPIVVFLVFARWNGKIVPKESRGEYSCGWKQDGWVPAYYALAILTMLWSATVMVETKAYVISATISQWYFAKDDSTPKRKIRSSLRNAFGPSAGTICFSGLLICVVRMVRAAVDSARREGATGIVNVVLRCCVNLLLVAVDFLNKFTVNFAAITGEAYCTSARMTYELLKRNLLSPVFVETISTRLLGGIIFVLSAIYAVVVCAILNGATNLGVYSYYVSLLAWALLMLVLGLFVHLLENVIDTIYVCYAIDRDRAEVCKPEVHDVYVQLPITRSHRTPLNV*

Click here to download the sequence:
Link to NCBI Protein BLAST