Transcript Information: R_Transcript_56685.p1


Annotated TAIR IDAT1G53400.1
Annotated Gene NameUbiquitin domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:19925009-19926400 | Forward length=114
E-Value1.9E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 128.166206990471
Replicate 230.227432495877
Replicate 333.175275139255
Condition 2: 8 Hour
Replicate 128.285395714921
Replicate 231.999192979628
Replicate 328.792209949579
Condition 3: 24 Hour
Replicate 131.863853135003
Replicate 229.850652119143
Replicate 331.888121483497


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56685.p1 GENE.R_Transcript_56685~~R_Transcript_56685.p1 ORF type:complete len:116 (+),score=31.76,UBD|PF16455.1|5.5e-35 R_Transcript_56685:163-510(+)
ATGGGTTGTATTTCTTCACGAGAAAAAGGTGATTCTTCTGACAATTCTAAGAAGATAAGAAAGCCAAAGCCATGGAGGCATTCTGAAGCCATTACTAGGGCACAACTCAATACGCTGCGAGAAGAATTTTGGGACACTGCTCCTCACTATGGTGGCAGAAAAGAAATTTGGGATGCACTTAGAGCTGCTGCTGAAGCTGAACTATCCCTTGCTCAGGCGATAGTTGACAGTGCTGGTGTAATTGTGCAAAATGCTGACCTGACAGTTTGCTATGATGAGAGAGGTGCAAAATATGAACTACCCAAGTATGTTCTGAGTGAGCCGACCAATTTGATTCGTGACAGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56685.p1 GENE.R_Transcript_56685~~R_Transcript_56685.p1 ORF type:complete len:116 (+),score=31.76,UBD|PF16455.1|5.5e-35 R_Transcript_56685:163-510(+)
MGCISSREKGDSSDNSKKIRKPKPWRHSEAITRAQLNTLREEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIVDSAGVIVQNADLTVCYDERGAKYELPKYVLSEPTNLIRDS*

Click here to download the sequence:
Link to NCBI Protein BLAST