Transcript Information: R_Transcript_56691.p1


Annotated TAIR IDAT5G25150.1
Annotated Gene NameTBP-associated factor 5
Annotated Gene Symbol(s)TAF5
Annotation TypeOrtholog
Chromosome Positionchr5:8677117-8682058 | Forward length=669
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.447447993012
Replicate 220.370479241446
Replicate 324.033298461537
Condition 2: 8 Hour
Replicate 121.89496120469
Replicate 223.693870326502
Replicate 329.296861850788
Condition 3: 24 Hour
Replicate 128.671598296298
Replicate 225.605136625573
Replicate 328.672566944535


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56691.p1 GENE.R_Transcript_56691~~R_Transcript_56691.p1 ORF type:complete len:671 (+),score=131.53,TFIID_NTD2|PF04494.11|7.5e-46,WD40|PF00400.28|0.021,WD40|PF00400.28|1.6e-05,WD40|PF00400.28|1.2e-06,WD40|PF00400.28|5.1e-07,WD40|PF00400.28|8.5e-07,WD40|PF00400.28|1.8e-07,Ge1_WD40|PF16529.1|11,Ge1_WD40|PF16529.1|8.7,Ge1_WD40|PF16529.1|1.9,Ge1_WD40|PF16529.1|4.3 R_Transcript_56691:187-2199(+)
ATGGAGGAAGAAGAAATAGAGAAAGCAGTGATAGCATATCTGAAGAAGAAAGGGTTCAAGCAAACTCAACTTGCTTTCCAAGAAGAGCAACAACAACAATCCAAGAATTCTTCTTCAAATTCCCAAACTGACCCTGATGTTGCCAAGCTCATCCTCTCCTTTTCCTCCGAGTTAGAGAGCCTCCCTGCTCAATATCATGATGCATATAGCAAGCTACGATCATGGGCCTATAATTCCCTGGATTTGTATAAGCATGAATTGCTCCGAGTGCTTTATCCAGTATTTATACATTGTTTCATGGATCTCGTGGCAAAGGGCCACCTTCAGGAAGCGCGTAATTTCTTTAATACCTTCCGTGAAGACCATGAGACTATGCATCAGAGAGACCTGCAAAAGTTGGAAGGAGTTCTTTCCCCTTCTCATTTAGAGGAGATGGAGTTTGCCCACACATTAAGGCAGAGCAAAGTTAACATCAAAATCTGTCAGTACTCTTATGAACTTCTCCTCCAGTATCTACACAATACACAGTCAATCACAATGCTAGGAGTTATTAATGAACACATCAACTTCCAAGTTTTTCCAGGTCAGCCTAGTTCAATATCTGATGATGCTGACGCTGTGACCCTAGTTGGTGGTGGCCAGGATGCAGTAAACCTGATCAACCAGAAAGAAATTCAATGGGGGATGCTGGAAGATTCACTAGAGGATCGCTTGGAGAAGGCAGGGGGTTTGCTTTCAGATTCAGAAAAGGTAGATGGTGAAATCAAGGAAGGGGAGAATGAAGAAAACAAGAAAAGATCTGCTGATGGAGGGAAACAAGGTGCATCTGTCAAGAAGTCTAAGAAGGAAAAAGTTGGGGGTGCTGGTGGTAAATCTGCACGGCCTGAGGCTAACCCTCCATCTGTGGCACCAAGAGTCAAACCAGAGCTTAGTTTGCCCGTAATACCAACTGAAGTAGAACATTCTATCCTGGAAGACCTTCGCAATCGTGTGCAGCTGAGCAGCGTGGCCCTGCCTTCAGTGAGCTTCTACACATTTATCAATACTCACAATGGGCTGAACTGTGCATCAATATCACATGATGGGTCCTTGGTTGCTGGTGGATTTTCTGACTCCTCACTAAAGATATGGGACATGGCAAAAATTGGACAGCAAAACAGCAGCTCTCCTCTACAGGGTGAAAAGGATACAGCTAATGATGAACATACGCTGAATGCAAATGGCAACAAAAGACCCTACACATTATTTCAGGGTCATTCTGGACCTGTTTATTCAGCTTCGTTTAGCCCACTTGGGGATTTTGTTCTCTCTTCCTCAGCAGACTCAACAGTACGACTATGGAGCACCAAGCTAAATGCCAATCTTGTGTGCTACAAGGGTCATAATTATCCTGTATGGGATGTACAGTTCAGTCCTTTTGGACATTATTTTGCTAGCTGCTCCCATGATAGAACAGCGAGGATATGGTCCATGGACAGATTACAGCCCCTGAGAATCATGGCTGGGCATTTATCAGATGTTGATTGTGTCAGGTGGCATGTAAACTGTAACTACATAGCTACTGGATCTAGTGATAAAACCGTGCGTTTATGGGACATACAGAGCGGGGAATGTGTCAGGATATTCATTGGTCACAGGAGTATGATCTTGTCCTTGGCAATGTCCCCTGATGGTCGTTACATGGCATCTGGTGATGAAGATGGTGCAATTATGATGTGGGATCTTGCTAGTGGTCGGTGTATTACCCCTTTGGTTGGTCACACATCATGTGTATGGACAATAGCTTTCAGCGGCGAAAGCTCTCTTCTTGCCTCTGGGTCAGCTGATTGCACAGTAAAACTGTGGGATGTGAATGCAAGTACAAAATTTTTAAGGACCGAGGAAAAGAGCGGGAGCTCCAATCGACTGAGATCTGTGAAGACTCTGCTGACAAAGTCCACGCCAGTTTACTCTCTGACGTTCTCCAGGAGAAATCTGTTATTTGGAGCTGGGGTTCTTTCTAGAATGTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56691.p1 GENE.R_Transcript_56691~~R_Transcript_56691.p1 ORF type:complete len:671 (+),score=131.53,TFIID_NTD2|PF04494.11|7.5e-46,WD40|PF00400.28|0.021,WD40|PF00400.28|1.6e-05,WD40|PF00400.28|1.2e-06,WD40|PF00400.28|5.1e-07,WD40|PF00400.28|8.5e-07,WD40|PF00400.28|1.8e-07,Ge1_WD40|PF16529.1|11,Ge1_WD40|PF16529.1|8.7,Ge1_WD40|PF16529.1|1.9,Ge1_WD40|PF16529.1|4.3 R_Transcript_56691:187-2199(+)
MEEEEIEKAVIAYLKKKGFKQTQLAFQEEQQQQSKNSSSNSQTDPDVAKLILSFSSELESLPAQYHDAYSKLRSWAYNSLDLYKHELLRVLYPVFIHCFMDLVAKGHLQEARNFFNTFREDHETMHQRDLQKLEGVLSPSHLEEMEFAHTLRQSKVNIKICQYSYELLLQYLHNTQSITMLGVINEHINFQVFPGQPSSISDDADAVTLVGGGQDAVNLINQKEIQWGMLEDSLEDRLEKAGGLLSDSEKVDGEIKEGENEENKKRSADGGKQGASVKKSKKEKVGGAGGKSARPEANPPSVAPRVKPELSLPVIPTEVEHSILEDLRNRVQLSSVALPSVSFYTFINTHNGLNCASISHDGSLVAGGFSDSSLKIWDMAKIGQQNSSSPLQGEKDTANDEHTLNANGNKRPYTLFQGHSGPVYSASFSPLGDFVLSSSADSTVRLWSTKLNANLVCYKGHNYPVWDVQFSPFGHYFASCSHDRTARIWSMDRLQPLRIMAGHLSDVDCVRWHVNCNYIATGSSDKTVRLWDIQSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGAIMMWDLASGRCITPLVGHTSCVWTIAFSGESSLLASGSADCTVKLWDVNASTKFLRTEEKSGSSNRLRSVKTLLTKSTPVYSLTFSRRNLLFGAGVLSRMS*

Click here to download the sequence:
Link to NCBI Protein BLAST