Transcript Information: R_Transcript_56738.p1


Annotated TAIR IDAT5G05800.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:1743234-1744751 | Reverse length=449
E-Value4E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.009438184991
Replicate 211.969228581266
Replicate 312.766493883206
Condition 2: 8 Hour
Replicate 112.788795704931
Replicate 215.738072888223
Replicate 313.989457866668
Condition 3: 24 Hour
Replicate 110.528421149011
Replicate 29.0609184614155
Replicate 39.8982613552211


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56738.p1 GENE.R_Transcript_56738~~R_Transcript_56738.p1 ORF type:complete len:314 (+),score=65.81,Myb_DNA-bind_3|PF12776.3|2.5e-17 R_Transcript_56738:1382-2323(+)
ATGCAGCTTGATATTTCCTTTGGATCTATGGAAAGTGAAGTTGCTGAGCACCGAAAAAAGGAATGTCTAAGGACAAGGTGGACAGCTTCCCTCGATAAGATATTTGCAGACTTGGTTGTGGAGCAGATTCGATTGGGAAATAGACCGAATAACTTATTTGACAAGAAAACATGGGGGCATATACGTGATGAATTTAACAAGCGAACATCTCTGAACTTCAATAACAATCAGTTGAGGAAACACCTGGATGTTCTTAGGACTCGCTACAACCAGATTAAGTCAGCTATTGGCCAAAATGATTTTGTCATGGACAATAATTGCTGCATTAGCTTTGATTTATGGGATGGCATAGGGGTGAACCCTGGGTCAGAACCAGTGAAGATCAAGGACTGCCCCATCTATGAGCAGCTCTGCGTTATATTTGCAGATAATGAGGCTGATGGGAGATATGCCCAGTCAAGTCATTACGAGGAGATGGAGCACAGGTCAAATGGAAATAATGCTGCTGGTTTAGCATTCAATCAGGGGACTGAGGCACAGGTACCCAATCCTGACACTCCGTCATCACTGAAATCCATGGAAGGGAATGCTGTTTCGGTTGAAAAGGGCAACAAAAATAATTTGGAGAATAAGAGAAGGTGTTCCTTAGAGGCACAACAAATTGAACAAAACCGAAGGGACCTAGAGATGCTTGATTCCATGGCACAAGCACTGTTCGATATGATCGCTGCCTCAAAGCTGAGAACAGTTACAGCAACCTCAAACAAAGAGAAGTTTTCTATTACTAGTTGCATTAGGGCGCTGGATGAAATCAAAGGCATGGGAGAACAACTGTATTTTGCGACTTTGGATCTTTTCGATGACCCTAACATGAGAGAAACCTTCATCTCTCTTAAATCTAATGAGAGAAGGTTACACTGGTTAGAGGGTAAAGTTTTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56738.p1 GENE.R_Transcript_56738~~R_Transcript_56738.p1 ORF type:complete len:314 (+),score=65.81,Myb_DNA-bind_3|PF12776.3|2.5e-17 R_Transcript_56738:1382-2323(+)
MQLDISFGSMESEVAEHRKKECLRTRWTASLDKIFADLVVEQIRLGNRPNNLFDKKTWGHIRDEFNKRTSLNFNNNQLRKHLDVLRTRYNQIKSAIGQNDFVMDNNCCISFDLWDGIGVNPGSEPVKIKDCPIYEQLCVIFADNEADGRYAQSSHYEEMEHRSNGNNAAGLAFNQGTEAQVPNPDTPSSLKSMEGNAVSVEKGNKNNLENKRRCSLEAQQIEQNRRDLEMLDSMAQALFDMIAASKLRTVTATSNKEKFSITSCIRALDEIKGMGEQLYFATLDLFDDPNMRETFISLKSNERRLHWLEGKVL*

Click here to download the sequence:
Link to NCBI Protein BLAST