Transcript Information: R_Transcript_56741.p1


Annotated TAIR IDAT5G58290.1
Annotated Gene Nameregulatory particle triple-A ATPase 3
Annotated Gene Symbol(s)RPT3
Annotation TypeOrtholog
Chromosome Positionchr5:23569155-23571116 | Forward length=408
E-Value1.1E-272
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1113.33815290488
Replicate 290.865596093366
Replicate 3110.94997004817
Condition 2: 8 Hour
Replicate 1100.32474898047
Replicate 2110.90619196495
Replicate 3144.09999551703
Condition 3: 24 Hour
Replicate 1150.99733252725
Replicate 2135.082632148
Replicate 3144.00536360597


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56741.p1 GENE.R_Transcript_56741~~R_Transcript_56741.p1 ORF type:complete len:473 (+),score=100.21,AAA|PF00004.25|3.1e-44,AAA_5|PF07728.10|7.5e-08,AAA_2|PF07724.10|9.7e-07,AAA_16|PF13191.2|9.8e+03,AAA_16|PF13191.2|5.1e-05,AAA_16|PF13191.2|1.5e+02 R_Transcript_56741:165-1421(+)
ATGGCGGCATCAGCGATGGTCCTCGACCCAAAACAACCCCCACCACCATCCCTCGAACCCCCACCCACAATCCCCTTCACCTCACCGGAAGAACAAGCCGCCGGCGAGGAAGAAGATCTCTACGGGTGGCTCAAATCCCTAGAACGCCAGCTGGAGTTCATGGACATCCAAGAGGGCTACGTCAAGGACGAGCTCAAGAACCTGAGAAGAGAGCTCTTGAGGGCCCAAGAGGAGGTCAAGAGGATCCAGTCTGTTCCTCTTGTGATTGGCCAGTTCATGGAGATGGTTGATCAGAATAACGGCATTGTGGGGTCCACTACTGGGAGCAATTATTATGTGAGGATTTTGAGTACGATTAATCGGGAGTTGTTGAAGCCCTCTGCTTCTGTTGCGCTTCACCGGCACTCGAATGCGCTCGTGGATGTGTTGCCCCCTGAGGCTGATTCGAGTATTTCTCTGTTGTCTCAGTCTGAGAAGCCCGATGTTACTTACACTGATATTGGCGGATGTGACATCCAGAAGCAGGAAATTCGTGAAGCAGTTGAGCTACCTTTGACTCATCATGAGTTATACAAACAAATAGGTATTGATCCTCCTCGTGGTGTTTTGCTGTATGGTCCTCCTGGCACTGGGAAAACAATGCTTGCCAAGGCTGTTGCCAATCATACAACTGCTGCCTTTATTAGAGTTGTTGGGTCAGAATTTGTTCAGAAATACTTGGGCGAGGGTCCCAGAATGGTTCGTGATGTATTTCGTCTTGCAAAGGAGAATGCACCTGCAATTATCTTTATTGATGAGGTAGATGCTATTGCCACTGCTAGATTTGATGCGCAGACTGGAGCTGATAGGGAAGTCCAGCGTATCCTTATGGAGCTTCTTAATCAGATGGATGGGTTCGACCAAACTGTAAACGTCAAGGTTATCATGGCAACTAATCGAGCTGACACTCTTGACCCTGCATTGCTACGACCGGGAAGGCTGGATCGTAAGATTGAGTTCCCTTTGCCTGATAGACGACAAAAGCGCCTTGTTTTTCAGGTATGTACTGCCAAAATGAATCTCGGTGATGAGGTTGACTTGGAGGATTACGTCTCGCGACCAGATAAAATTAGCGCTGCCGAGATTGCTGCTATTTGTCAAGAAGCAGGGATGCATGCTGTGCGCAAGAACCGCTATGTCATCCTGCCAAAGGATTTTGAGAAGGGTTACAGAGCCAATGTGAAGAAGCCTGACACAGACTTCGATTTCTACAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56741.p1 GENE.R_Transcript_56741~~R_Transcript_56741.p1 ORF type:complete len:473 (+),score=100.21,AAA|PF00004.25|3.1e-44,AAA_5|PF07728.10|7.5e-08,AAA_2|PF07724.10|9.7e-07,AAA_16|PF13191.2|9.8e+03,AAA_16|PF13191.2|5.1e-05,AAA_16|PF13191.2|1.5e+02 R_Transcript_56741:165-1421(+)
MAASAMVLDPKQPPPPSLEPPPTIPFTSPEEQAAGEEEDLYGWLKSLERQLEFMDIQEGYVKDELKNLRRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYTDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRANVKKPDTDFDFYK*

Click here to download the sequence:
Link to NCBI Protein BLAST