Transcript Information: R_Transcript_56750.p1


Annotated TAIR IDAT3G07890.1
Annotated Gene NameYpt/Rab-GAP domain of gyp1p superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:2516639-2518784 | Reverse length=400
E-Value2.5E-242
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 122.793037537365
Replicate 216.786382312523
Replicate 319.941652272793
Condition 2: 8 Hour
Replicate 113.548016645938
Replicate 216.231503062383
Replicate 319.441572796455
Condition 3: 24 Hour
Replicate 116.256924407435
Replicate 217.409100291801
Replicate 319.943365438061


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56750.p1 GENE.R_Transcript_56750~~R_Transcript_56750.p1 ORF type:complete len:394 (+),score=79.90,RabGAP-TBC|PF00566.14|3.9e-56 R_Transcript_56750:269-1450(+)
ATGTATGGGACTCCAACAAAAAGAAACCTTCCATATGAATACCAATCTCATGTTATTAATTATAGGCCTAGTATCCATACAAGGAGGGCCAATCTTACAGTAAAGTTCCAAGATATATATGGGTTTACAGTAGAAGGCAATGTGGATGATGTCAATGTGTTGAATGAGGTTAGAGAGAAAGTGAGGCAACAGGGTAGGGTTTGGTGGGCATTAGAAGCTAGTAAAGGTGCTAATTGGTACCTACAGACTCATGCCTCATCAACCCTTAAAGCCTCCCTTAAATTATCAGCTTTAGCAAATGCTATTACCTTAAAGAGGTTAATTAGGAAGGGAATTCCTCCAGTTTTGAGGCCAAAGGTTTGGTTTGCTTTATCTGGGGCTGCCAAGAAAAAGTCCACTGTGCCTGAGAGTTATTATAGTGATCTAACCAAGGCAACTGAGGGTAAGGTCACGGCCGCCACCAAGCAGATTGATCATGACCTACCTCGAACATTCCCAGGTCACCCTTGGTTAGATACGAAAGAGGGCCATGCAGCTCTGCGGCGTGTTCTTGTGGGATACTCTTTTCGAGATTCTTATGTTGGTTATTGTCAGGGTTTAAATTATGTTGCGGCATTGTTGTTACTTGTCATGAAGACAGAAGAAGATGCTTTCTGGATGCTGGCTGTTCTTCTGGAAGACGTGTTAGTTAATGATTGTTACGCAAATAACTTGTCTGGCTGCCATGTTGAGCAGAGGGTGTTCAAAGATTTGCTCTCTAAAAAGTGTCCTAGCATAGCAGCTCATTTGGAAGCGTTGGAGTTCGATGTCTCCCTGGTGGCCACTGAATGGTTCTTGTGCCTCTTCTCAAAAAGCTTGCCTTCAGAGACAACTTTACGAGTGTGGGATGTCCTTTTCTATGAGGGAGCTAAAGTTTTGTTTCATGTAGCATTGGCCATATTTAAGATGAAAGAAGATGAGTTGCTTCTAGCCCATCAAGTTGGTGATGTAATAAGCCTTCTTCAGAAAACTACTCACCACATGTTTGACCCTGATGATTTATTGACGGTGGCTTTTGAGAAAATAGGTTCGATGACGACATACACAATATCAAAGCAAAGAAAAAAGCAGGAACCAGCTGTGATGGCAGAACTTGACCAGAGATTCAGACGCCTAAATTCTCTTACTGGGGATGAGAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56750.p1 GENE.R_Transcript_56750~~R_Transcript_56750.p1 ORF type:complete len:394 (+),score=79.90,RabGAP-TBC|PF00566.14|3.9e-56 R_Transcript_56750:269-1450(+)
MYGTPTKRNLPYEYQSHVINYRPSIHTRRANLTVKFQDIYGFTVEGNVDDVNVLNEVREKVRQQGRVWWALEASKGANWYLQTHASSTLKASLKLSALANAITLKRLIRKGIPPVLRPKVWFALSGAAKKKSTVPESYYSDLTKATEGKVTAATKQIDHDLPRTFPGHPWLDTKEGHAALRRVLVGYSFRDSYVGYCQGLNYVAALLLLVMKTEEDAFWMLAVLLEDVLVNDCYANNLSGCHVEQRVFKDLLSKKCPSIAAHLEALEFDVSLVATEWFLCLFSKSLPSETTLRVWDVLFYEGAKVLFHVALAIFKMKEDELLLAHQVGDVISLLQKTTHHMFDPDDLLTVAFEKIGSMTTYTISKQRKKQEPAVMAELDQRFRRLNSLTGDES*

Click here to download the sequence:
Link to NCBI Protein BLAST