Transcript Information: R_Transcript_56780.p1


Annotated TAIR IDAT3G27110.1
Annotated Gene NamePeptidase family M48 family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:9998006-9999892 | Forward length=344
E-Value1.5E-164
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.3305066894978
Replicate 25.3400995278446
Replicate 36.6204443919516
Condition 2: 8 Hour
Replicate 14.7414825186862
Replicate 27.8844727879325
Replicate 38.3413470769986
Condition 3: 24 Hour
Replicate 17.7631891492525
Replicate 24.7170206875801
Replicate 36.768741044792


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56780.p1 GENE.R_Transcript_56780~~R_Transcript_56780.p1 ORF type:complete len:346 (+),score=58.40,Peptidase_M48|PF01435.14|9.7e-20 R_Transcript_56780:41-1078(+)
ATGGCAGCAGCAGCTCTTTCTCTCACCTCCTTTGGCCTCTTTTCACATCATCATCGGCCTTCTTGTTTTAGTCTGAAACTGATCCCCGATAATTCATCTCATTTACTACGCTCCACAATCATTAATAATAATACTAATAATTCAAAGGTTAAAATTTCTGTGTATTGCAGAGCTTCTATTTCATCTTCATCTTCATCTGCTGTTGTGTTTCGCAATCTTGACGCTGATGATTTTAGACACCCCCTTGATAGACAGAACACGTTGATATTGAGAGCCATTCCTGGATTGGATGAAATTGGCAAAGTTTTATTAGGGTCCATTGCGGAGCAGGTCATGTATCTCGAGAACATAGGGACTTCAGTTCTTGTTTCCAAAAATCAGCTTCCTGAACTGCACCAATTGATGCTTGAGGCTGCAGAAATACTGAACGTCGAGGCTCCTGATCTATATGTTCGTCAAAACCCTGTACCTAATGCATACACTTTGGCTATCAGTGGTAAGAAGCCATTTGTTGTTGTCCACACAAGCCTCATCGAGCTCTTGACACGAAAGGAATTGCAGGCCGTCTTAGCCCATGAGTTGGGCCATTTGAAATGTGACCATGGATTATGGTTGACTTATGCAAATATCCTTGCCCTTGGCGCATCCACAATTCCCGGACTTGGTGGGTTCATTGCCCGGAGAATAGAAGATCAGCTTTTCCGTTGGATCCGTGCTGCAGAGCTAACTTGTGACCGTGCAGCACTTCTCGTTGCTCAAGACCCCAAGACTGTCGTATCAGTTATGATGAAATTGGCTGGAGGCACCCCTTCTATGGCAGACCAGCTCAATGTAGATGCCTTTTTGGAGCAAGCTCGCTCTTATGATAAAGCTTCTTCTAGCCCTGTAGGGTGGTATATAAGAAATGCTCAAACACAACAACTCTCACACCCTCTTCCAGTGTTACGTGCTCGTGAAATTGATGAATGGTCGAGAAGTCGAGAGTACAATTACCTTCTGCAGCGTGCTAATCAGATCCGCAATGTGCAGAAGGTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56780.p1 GENE.R_Transcript_56780~~R_Transcript_56780.p1 ORF type:complete len:346 (+),score=58.40,Peptidase_M48|PF01435.14|9.7e-20 R_Transcript_56780:41-1078(+)
MAAAALSLTSFGLFSHHHRPSCFSLKLIPDNSSHLLRSTIINNNTNNSKVKISVYCRASISSSSSSAVVFRNLDADDFRHPLDRQNTLILRAIPGLDEIGKVLLGSIAEQVMYLENIGTSVLVSKNQLPELHQLMLEAAEILNVEAPDLYVRQNPVPNAYTLAISGKKPFVVVHTSLIELLTRKELQAVLAHELGHLKCDHGLWLTYANILALGASTIPGLGGFIARRIEDQLFRWIRAAELTCDRAALLVAQDPKTVVSVMMKLAGGTPSMADQLNVDAFLEQARSYDKASSSPVGWYIRNAQTQQLSHPLPVLRAREIDEWSRSREYNYLLQRANQIRNVQKV*

Click here to download the sequence:
Link to NCBI Protein BLAST