Transcript Information: R_Transcript_56798.p1


Annotated TAIR IDAT5G32440.3
Annotated Gene NameUbiquitin system component Cue protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:12077014-12078396 | Forward length=265
E-Value2E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.025871142637
Replicate 212.262545201115
Replicate 316.073215035956
Condition 2: 8 Hour
Replicate 111.72852354616
Replicate 214.562759182285
Replicate 317.770274262816
Condition 3: 24 Hour
Replicate 116.977201983512
Replicate 213.529696630354
Replicate 314.898353610409


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56798.p1 GENE.R_Transcript_56798~~R_Transcript_56798.p1 ORF type:3prime_partial len:238 (+),score=65.39,CUE|PF02845.12|3e-06,CUE|PF02845.12|2.9e+02,CUE|PF02845.12|3e+02 R_Transcript_56798:550-1260(+)
ATGTCTGCAATAGTGTGTGGTAAGAGATCGTCAATTTTCGAGGAAATTCCGTCAACTTCATCGTCGTCTTCATCTCCGGTTTCTAAGCGTATTCGTTGCTCTTCTAGATCTCCGGTTCGGTTTTCTCCTCCTCGGTCCGGTTCACCTTTTCTCTTGCTCGATCATCTTGTTTCCATCTTTCCTCATATGGACAAGAAGCTTATTGAGCAAGCTCTTGAGAACAGTGGACATGATTTGGACTTGGCAATCAAGTGTTTGAAGGACCTTCATTTAGGATGTACTGGTAACAATAATGTTGCTGCAGATTCCACTTCAGACATCTATCCACAATCAAGCGGTTCCCCACAAGTTCAAGGTGATGAAGCAGATGGATCAATAAAAGACCCATTGGCTTCAAGAACTTCACCTGATGCTGCACAGTGGGTGGAGCTTTTTGTAAGGGAAATGAGCTCTGCATGTGATGTGGACGATGCAAGAATTCGAGCGGCAAGAGCTCTTGAGGCTTTTGAGAAATCAATCTATGCTCATGCGAATGCAGAAGCTGCACAAAATTTTCAGCAGGAGAACCTGATGCTGAAAGAGCAGCTTCAAGCCGTACTTCAGGAAAATGGAATTCTCAAACGTGCTGTGTCTATTCAGCATGAGCGGCAAAGAGAGTATGATGCTAAGTCACAAGAGGTGCAACAACTTAAGCAACTTCTGTCACAGTGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56798.p1 GENE.R_Transcript_56798~~R_Transcript_56798.p1 ORF type:3prime_partial len:238 (+),score=65.39,CUE|PF02845.12|3e-06,CUE|PF02845.12|2.9e+02,CUE|PF02845.12|3e+02 R_Transcript_56798:550-1260(+)
MSAIVCGKRSSIFEEIPSTSSSSSSPVSKRIRCSSRSPVRFSPPRSGSPFLLLDHLVSIFPHMDKKLIEQALENSGHDLDLAIKCLKDLHLGCTGNNNVAADSTSDIYPQSSGSPQVQGDEADGSIKDPLASRTSPDAAQWVELFVREMSSACDVDDARIRAARALEAFEKSIYAHANAEAAQNFQQENLMLKEQLQAVLQENGILKRAVSIQHERQREYDAKSQEVQQLKQLLSQC

Click here to download the sequence:
Link to NCBI Protein BLAST