Transcript Information: R_Transcript_56802.p1


Annotated TAIR IDAT5G32440.3
Annotated Gene NameUbiquitin system component Cue protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:12077014-12078396 | Forward length=265
E-Value1E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.296858973636
Replicate 211.123867770224
Replicate 311.680919171548
Condition 2: 8 Hour
Replicate 110.702431036544
Replicate 213.920019159413
Replicate 319.113285355242
Condition 3: 24 Hour
Replicate 114.595692012315
Replicate 217.089174107269
Replicate 317.68410577352


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56802.p1 GENE.R_Transcript_56802~~R_Transcript_56802.p1 ORF type:3prime_partial len:151 (+),score=39.83,CUE|PF02845.12|1.4e-06 R_Transcript_56802:266-715(+)
ATGTCTGCAATAGTGTGTGGTAAGAGATCGTCAATTTTCGAGGAAATTCCGTCAACTTCATCGTCGTCTTCATCTCCGGTTTCTAAGCGTATTCGTTGCTCTTCCAGTTCTCCGGTTCGGTTTTCTCCTCCTCGGTCCGGTTCACCTTTTCTCTTGCTCGATCATCTTGTTTCCATCTTTCCTCATATGGACAAGAAGCTTATTGAGCAAGCTCTTGAGAACAGTGGACATGATTTGGACTTGGCAATCAAGTGTTTGAAGGACCTTCATTTAGGATGTACTGGTAACAATAATGTTGCTGCAGATTCCACTTCAGACATCCATCCACAATCAAGCGGTCCCCCACAAGGTGATGAAGCAGGTGGAGCAACACAAGACCCATTGGCTTCTAGAAGTTCACCTGATGCTGCACAGTGGGTGGAGCTTTTTGTAAGGGAAATGAGCTCTGCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56802.p1 GENE.R_Transcript_56802~~R_Transcript_56802.p1 ORF type:3prime_partial len:151 (+),score=39.83,CUE|PF02845.12|1.4e-06 R_Transcript_56802:266-715(+)
MSAIVCGKRSSIFEEIPSTSSSSSSPVSKRIRCSSSSPVRFSPPRSGSPFLLLDHLVSIFPHMDKKLIEQALENSGHDLDLAIKCLKDLHLGCTGNNNVAADSTSDIHPQSSGPPQGDEAGGATQDPLASRSSPDAAQWVELFVREMSSA

Click here to download the sequence:
Link to NCBI Protein BLAST