Transcript Information: R_Transcript_56824.p1


Annotated TAIR IDAT1G21065.1
Annotated Gene Nameunknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0047 (InterPro:IPR001602); Has 3800 Blast hits to 3784 proteins in 1137 species: Archae - 215; Bacteria - 2154; Metazoa - 42; Fungi - 99; Plants - 99; Viruses - 0; Other Eukaryotes - 1191 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:7374210-7375644 | Forward length=217
E-Value3.6E-92
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 136.139028221905
Replicate 238.405293223781
Replicate 334.302551777153
Condition 2: 8 Hour
Replicate 126.085444064402
Replicate 231.799646035455
Replicate 328.185164229646
Condition 3: 24 Hour
Replicate 131.379515406711
Replicate 227.485950778207
Replicate 330.136839619145


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56824.p1 GENE.R_Transcript_56824~~R_Transcript_56824.p1 ORF type:complete len:199 (+),score=30.81,UPF0047|PF01894.13|9e-38 R_Transcript_56824:41-598(+)
ATGGAGGCCTCAGCTATTTTGGGGGCAAAGCCATTTGCACCGTTTTCTTCCATTCGAATAAGATCAGTTCATAGCAGCCCAGCAATCGACACCTTTTCTTCAAATTCAATGGCAGCGACTCCTTCTGCTCCCAAGTGGGCTCAGAAGACCATCACTCTCTCTCCTCATCGCCGTGGCTGCCACCTCATCACCTCTAAGGTACTGAAGGAGATCGGAGACGATTTATCTGAATTCAAATGTGGGCTTGCTCATCTTTTGTTACAACATACAAGTGCTTCTCTGACAATAAATGAGAATTATGATGCTGATGTTCGAGAGGACACTGAGACATTCCTCAACAGGGTAGTGCCAGAGGGAAGTTCTGCACCTTGGAAGCATACTCTAGAAGGACCGGATGACATGCCAGCTCATATTAAGTCATCAATGTTCGGCTGCACATTAACGATTCCAATCACTGATGGAAAGCTTAACATGGGAACTTGGCAGGGAATATGGCTATGTGAGCACCGTGATTACCCAACCCCGCGCAAAGTTGTTGTGACACTTAATGGAATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56824.p1 GENE.R_Transcript_56824~~R_Transcript_56824.p1 ORF type:complete len:199 (+),score=30.81,UPF0047|PF01894.13|9e-38 R_Transcript_56824:41-598(+)
MEASAILGAKPFAPFSSIRIRSVHSSPAIDTFSSNSMAATPSAPKWAQKTITLSPHRRGCHLITSKVLKEIGDDLSEFKCGLAHLLLQHTSASLTINENYDADVREDTETFLNRVVPEGSSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGKLNMGTWQGIWLCEHRDYPTPRKVVVTLNGI*

Click here to download the sequence:
Link to NCBI Protein BLAST