Transcript Information: R_Transcript_56825.p1


Annotated TAIR IDAT1G21065.1
Annotated Gene Nameunknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0047 (InterPro:IPR001602); Has 3800 Blast hits to 3784 proteins in 1137 species: Archae - 215; Bacteria - 2154; Metazoa - 42; Fungi - 99; Plants - 99; Viruses - 0; Other Eukaryotes - 1191 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:7374210-7375644 | Forward length=217
E-Value2.2E-50
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.8236624681333
Replicate 20.92801327806842
Replicate 31.3921221743518
Condition 2: 8 Hour
Replicate 11.3528102180799
Replicate 20.61770391826479
Replicate 30.5014257077455
Condition 3: 24 Hour
Replicate 13.4246452770608
Replicate 20.85296581344774
Replicate 31.3301919975462


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56825.p1 GENE.R_Transcript_56825~~R_Transcript_56825.p1 ORF type:complete len:181 (+),score=36.94,UPF0047|PF01894.13|1.7e-15 R_Transcript_56825:61-543(+)
ATGGAGGTCTCAGCTATTTTGGGGGCAAAGCCATTTGCACCGTTTTCTTCCATTCGAATAAGATCAGTTCATAGCAGCCCAGCAATCGACACCTTTTCTTCAAATTCAATGGCAGCGACTCCTTCTGCTCCCAAGTGGGCTCAGAAGACCATCACTCTCTCTCCTCATCGCCGTGGCTGCCACCTCATCACCTCTAAGGTACTGAAGGAGATTGGAGACGAGTTATCTGAATTGAAATGTGGGCTTGCTCATCTTTTCTTACAACATACCAGTGCTTCTCTGACAATAAATGAGAATTATGATGCTGATGTTCGAGAGGACACTGAGACATTCCTCAACAGGGTAGTGCCAGAGGGAAGTTCTGCACCTTGGAAGCATACTCTAGAAGGATTCCAATCACTGATGGAAAGCTTAACATGGGAACTTGGCAGGTACCCAAATATTCATAATGAACTTCGATGGGAGCTTCTCTTGAAGCAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56825.p1 GENE.R_Transcript_56825~~R_Transcript_56825.p1 ORF type:complete len:181 (+),score=36.94,UPF0047|PF01894.13|1.7e-15 R_Transcript_56825:61-543(+)
MEVSAILGAKPFAPFSSIRIRSVHSSPAIDTFSSNSMAATPSAPKWAQKTITLSPHRRGCHLITSKVLKEIGDELSELKCGLAHLFLQHTSASLTINENYDADVREDTETFLNRVVPEGSSAPWKHTLEGFQSLMESLTWELGRYPNIHNELRWELLLKQ*

Click here to download the sequence:
Link to NCBI Protein BLAST