Transcript Information: R_Transcript_56830.p1


Annotated TAIR IDAT1G21065.1
Annotated Gene Nameunknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0047 (InterPro:IPR001602); Has 3800 Blast hits to 3784 proteins in 1137 species: Archae - 215; Bacteria - 2154; Metazoa - 42; Fungi - 99; Plants - 99; Viruses - 0; Other Eukaryotes - 1191 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:7374210-7375644 | Forward length=217
E-Value3.7E-67
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6046559081071
Replicate 21.4997357440213
Replicate 31.6361955425823
Condition 2: 8 Hour
Replicate 11.2108394754132
Replicate 21.9657918102141
Replicate 32.2938848586203
Condition 3: 24 Hour
Replicate 10.63070898977209
Replicate 22.1812893408263
Replicate 31.4431453639712


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56830.p1 GENE.R_Transcript_56830~~R_Transcript_56830.p1 ORF type:complete len:182 (+),score=37.08,UPF0047|PF01894.13|6.4e-26 R_Transcript_56830:61-546(+)
ATGGAGGTCTCAGCTATTTTGGGGGCAAAGCCATTTGCACCGTTTTCTTCCATTCGAATAAGATCAGTTCATAGCAGCCCAGCAATCGACACCTTTTCTTCAAATTCAATGGCAGCGACTCCTTCTGCTCCCAAGTGGGCTCAGAAGACCATCACTCTCTCTCCTCATCGCCGTGGCTGCCACCTCATCACCTCTAAGGTACTGAAGGAGATTGGAGACGAGTTATCTGAATTGAAATGTGGGCTTGCTCATCTTTTCTTACAACATACCAGTGCTTCTCTGACAATAAATGAGAATTATGATGCTGATGTTCGAGAGGACACTGAGACATTCCTCAACAGGGTAGTGCCAGAGGGAAGTTCTGCACCTTGGAAGCATACTCTAGAAGGACCGGATGACATGCCAGCTCATATTAAGTCATCAATGATTCCAATCACTGATGGAAAGCTTAACATGGGAACTTGGCAGGTACCCAAATATTCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56830.p1 GENE.R_Transcript_56830~~R_Transcript_56830.p1 ORF type:complete len:182 (+),score=37.08,UPF0047|PF01894.13|6.4e-26 R_Transcript_56830:61-546(+)
MEVSAILGAKPFAPFSSIRIRSVHSSPAIDTFSSNSMAATPSAPKWAQKTITLSPHRRGCHLITSKVLKEIGDELSELKCGLAHLFLQHTSASLTINENYDADVREDTETFLNRVVPEGSSAPWKHTLEGPDDMPAHIKSSMIPITDGKLNMGTWQVPKYS*

Click here to download the sequence:
Link to NCBI Protein BLAST