Transcript Information: R_Transcript_56886.p1


Annotated TAIR IDAT1G53800.2
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:20081888-20084320 | Forward length=572
E-Value5.4E-154
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.126642721453
Replicate 25.0693122580446
Replicate 36.1973707880001
Condition 2: 8 Hour
Replicate 16.7503840008673
Replicate 27.3515227971021
Replicate 37.3352399082386
Condition 3: 24 Hour
Replicate 19.9064510640093
Replicate 26.7223220591143
Replicate 37.6831840082431


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56886.p1 GENE.R_Transcript_56886~~R_Transcript_56886.p1 ORF type:complete len:584 (+),score=136.55,NUMOD3|PF07460.7|2.5e-07,NUMOD3|PF07460.7|5.1e+02,NUMOD3|PF07460.7|1.4e+03 R_Transcript_56886:290-2041(+)
ATGCCTTTATTAGATATTGCTGTTGCACAATCTTCTTTCCAGAACTATATAAGCTACCCAAGGTGGCGGCTCTTTATTAATGGTAAAGGACCAAATTACTCTCTTTTACAATATGAGGAACGATGTGCATCATTTCAGAAGTCCTTCCAAAATCCTGGGAACTTGAACTTTCATTTGGTTCATTGTAAGAAGTCACATCCTAAATTCCTTATTAAAGCCGTTGCTACTTTGGAGCCAAAATGTCCTGTCCAGAGTAAAGATGGAAAGAAGGAAGGCAAAGTATTGTCATCTACTGTTCAATCATTGTCCTCAACAGATCGTAGTGAATCTGAAGCTGAGGATCCAGAGGAAGTAGAAGACAAAGAAAGGTTGAGACGCTTGCGGATTTCCAAAGCAAATAAGGGAAACACACCATGGAACAAAGGGAAAAAGCACAGTCCAGAAACTCTTCAACGTATCCGGGAGAGGACTAGACTTGCTATGCAGGACCCTAAGGTGAAAATGAAATTGGCGAATATGGGTCATGCTCAAAGCATAGAGACTAGAGAAAAAATTGCAGCTGGAGTGCGAATGGGCTGGCAAAGACGCCGTGAGAAGCTTCTGCTTCAGGAAACTTGCTTATTTGACTGGCAGAACCTAATTGCTGAAGCTGCTAGAAAAGGCTTTTACAACGAAGAGGAGCTGCAATGGGACTCCTACAAGATCTTGAATGAGAAGTTGCAGCAGGAGTGGTTGGCTAGCATAGAATATAGAAAATCAATGCCTAGAACCAAAGGTAGCAATAGAGCACCAAAGTCTGCTGAACAACGGAGAAAAATTGCAGAGGCCATTGCTGCTAAATGGGCTGACCCCGAATACCGCTCAAAGGTCTGTTCTGGCTTAGCTAAATATCATGGAACACCAGAGGGGGCTGAAAGAAAGGCAAGAAGGAAGCCAAGTGGCGAGGCATGGTCCACAAGAACTTCCAAGAGAAATGTTGGGGCAGAAAAATCTTCCGAAATTGAAATGAAGTTGAGGTCTCAACAATCCAAGTTGAAGAAAAGGACGGCCCCAAAGTACAAAGATCCTTTGGCAAAAACCAAACTGGAAATGCTCAAGAGTATCAGGGCACAGAGGCTGGCATCAGAAACGAAGAGTGAAGCCTTGCAACGAGCAAGACTGCTGATAGCAGAAGCTCAAAAGGCTGCAAAGGCTCTCGAAGTTGCTGCGACAAAAAGCCCTGTTGCTCAAGCTTCACTCGTTGAGTCAAGAAAACTCATTGCCGAAGCCATTGAATCAATCAAATCAATTGAGAGTGGGGGGCTCACTTCTCAAGATGATCTTGCATCTGAGAATCAGAATTTTGTCAGAAACCATGAAGAGATCCTCACAGTTACAGAAGAAGACAATGAGCTACCTCAAAGGGGGTTGAACGGCATTGCTTCTGTGCAAACAAGTGAAGGCCATAATCCCGATTTAAACCTCTACAGCCTGACAATGCTGGACAAAATGGACAGGAACTATCAGCCGCCAACGAGTCTCAGTGGGTGTGAATTACCTAAGCTCGAACTAGATAATTTCATAGGGAATTCAGATTCAGGAGAGTTCACACGTCAACATCAACCTGATTCAAACGGTACTATCAGATTGAATGGCGTTTCTTCATACAACGGAGCTAAGTTGCAATTTCAAAAAGAGCGGACATCTGCTGTGAAAACAGCGACCAAGAAATGGGTTCGCGGGAGGCTCGTTGAAGTTGCAGAAGGTGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56886.p1 GENE.R_Transcript_56886~~R_Transcript_56886.p1 ORF type:complete len:584 (+),score=136.55,NUMOD3|PF07460.7|2.5e-07,NUMOD3|PF07460.7|5.1e+02,NUMOD3|PF07460.7|1.4e+03 R_Transcript_56886:290-2041(+)
MPLLDIAVAQSSFQNYISYPRWRLFINGKGPNYSLLQYEERCASFQKSFQNPGNLNFHLVHCKKSHPKFLIKAVATLEPKCPVQSKDGKKEGKVLSSTVQSLSSTDRSESEAEDPEEVEDKERLRRLRISKANKGNTPWNKGKKHSPETLQRIRERTRLAMQDPKVKMKLANMGHAQSIETREKIAAGVRMGWQRRREKLLLQETCLFDWQNLIAEAARKGFYNEEELQWDSYKILNEKLQQEWLASIEYRKSMPRTKGSNRAPKSAEQRRKIAEAIAAKWADPEYRSKVCSGLAKYHGTPEGAERKARRKPSGEAWSTRTSKRNVGAEKSSEIEMKLRSQQSKLKKRTAPKYKDPLAKTKLEMLKSIRAQRLASETKSEALQRARLLIAEAQKAAKALEVAATKSPVAQASLVESRKLIAEAIESIKSIESGGLTSQDDLASENQNFVRNHEEILTVTEEDNELPQRGLNGIASVQTSEGHNPDLNLYSLTMLDKMDRNYQPPTSLSGCELPKLELDNFIGNSDSGEFTRQHQPDSNGTIRLNGVSSYNGAKLQFQKERTSAVKTATKKWVRGRLVEVAEGE*

Click here to download the sequence:
Link to NCBI Protein BLAST