Transcript Information: R_Transcript_56950.p1


Annotated TAIR IDAT5G07400.1
Annotated Gene Nameforkhead-associated domain-containing protein / FHA domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2340814-2345321 | Forward length=1084
E-Value4.8E-208
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6193905482861
Replicate 21.5433178083775
Replicate 33.0933884958907
Condition 2: 8 Hour
Replicate 12.553226943217
Replicate 23.1725695603733
Replicate 33.5372369414087
Condition 3: 24 Hour
Replicate 12.9825527338556
Replicate 22.0358700514379
Replicate 33.4795838220196


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56950.p1 GENE.R_Transcript_56950~~R_Transcript_56950.p1 ORF type:complete len:585 (+),score=133.14,Tyr-DNA_phospho|PF06087.8|8.4e-26,Tyr-DNA_phospho|PF06087.8|1.6,HIRAN|PF08797.7|1.1e-13 R_Transcript_56950:1278-3032(+)
ATGGAGAAGAGATTTCGAAGAAATAATGATCCAGAGGGAAATGTATCAGCTTTGAAGCAGCAAACACTGCCTTGTTATGGTTTTGATGATGTAGAGGGAAATGCTGTTTTGAGGGCTGCCATTGCACAGTCAACTGATATAGTAGTTTCCTGTGAAAATGGGGCGAGTTTACAGCCAAAGGTTGACCAATTATCTCCTGAAGGGGACAGTGGTGCTATGAATAGTAGTATTGCTGATGAGAATAATGCTAATGCTTCGACATTGGTTGACATGGACGGGAAGAATCCCATCCATCCTGGAGCTGTTAGGCCGAATGAATGCTTTGAAAAGTTCATCCCACCTCCTGGAAAGAATTTTTACCTGAATCGCCTTGAGGGCATGCATCAGAACTCATCTGTCCAACAAAATGCTGTTTCCTTGCCAGAACTCCTGCATCCTATCGATAACATCTCAAGAATATTCATTGCAACTTTTACCAGTGATGTTGGATGGTTTTTGTCATGTTGTGATATACCATCCCATCTGCCAATTACCATAGCATGCCATAACGCCGAAAGATGTTGGAATTCGGACCCTGAGAGGAGATATTGTGTGCCTTATCCGGACTTCCCAAATGTAGTTATAGTGTATCCGCCCTTTCCCGAGGCAATAGCCTTTGGCAATGATCGGAGGAAAAAAGGTGTTGCTTGTCATCATCCAAAGTTGCTTGTTTTGCAAAGAGAAGATACTATGCGTGTCATCATAACATCTGCAAATCTAGTTGCAAAACAGTGGAATCATGTAACAAATACCATTTGGTGGCAAGACTTCCCATGCAGAATTTCTCCGGACTGCACATCCCTTTTCAACCAGATGTATAGCAGGTTCACAAGTAGTGACATAAAATCTGATTTTGCTGCTCAGCTGGCTGGATTCATGGCAACTCTTGTGACTGATGTGCCGAGTCAGGCCCATTGGATTGTTGAGATGACCAAGTATGACTTCACAGGGGCTAATGTGTATCTTGTTGCTTCAGTTCCTGGAATTCATTCGTATAGATCTCCACCTCCATGTATATCTGTCTGGAATTCTAAATGCGGTGGAAAATACTTTGGTTCAGTTGAAGTATCTATTGTTGGGTTAAGTCATCTTTTCCGGACAGCAAAGGACTCAAATGGTGTAGAATTGAAGAAATTGGCAGCTTATCTTGGGAAGTCTTCTGATAAAGAAAGTGGAATGTCAGAGATTGTATTAAGAAGAAATAAAGATTTACAGGCAGATCCAAATGCTGTGAGTGTTCTGGTTCCTAATCCCATGGAGCTCTCTGAAGAAGATTGTGTCCAACTTGGCTTTCTCCCTCGAACTGTTGCCAAATGGGTTGCTCCTTTATGGGATATTGGATTTTTCAGATTCCATGGGTGTGTCTTTGGTCGGGAAGCTGTTGCAGCTGCATTTGGAGAAAACAACATTAGAGTGCGGTTGATTCTTAATGTATCTCAGGGGCCCCATTTTCACAACTTTCCAAAAATGATCAGCCCTGAACATGTTATTGCATTTTGCTCACTTATTGCTTCTGTTCAGAGGTCGACAGGCCTCTGGCGATTGGAAGAGGTACTACGGCAATATAAATGGCCTGAACATTTGGAGTCAGATTTCACTTACTGTTCTTCTTCCATAGGGACATCAGTCAATGCACAATTTCTATCTGCATTTTCATCAGCTGCTGGGAAGAAATCCCGACAAATATTGGATTCTGAGGATCTGATCCAGAGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56950.p1 GENE.R_Transcript_56950~~R_Transcript_56950.p1 ORF type:complete len:585 (+),score=133.14,Tyr-DNA_phospho|PF06087.8|8.4e-26,Tyr-DNA_phospho|PF06087.8|1.6,HIRAN|PF08797.7|1.1e-13 R_Transcript_56950:1278-3032(+)
MEKRFRRNNDPEGNVSALKQQTLPCYGFDDVEGNAVLRAAIAQSTDIVVSCENGASLQPKVDQLSPEGDSGAMNSSIADENNANASTLVDMDGKNPIHPGAVRPNECFEKFIPPPGKNFYLNRLEGMHQNSSVQQNAVSLPELLHPIDNISRIFIATFTSDVGWFLSCCDIPSHLPITIACHNAERCWNSDPERRYCVPYPDFPNVVIVYPPFPEAIAFGNDRRKKGVACHHPKLLVLQREDTMRVIITSANLVAKQWNHVTNTIWWQDFPCRISPDCTSLFNQMYSRFTSSDIKSDFAAQLAGFMATLVTDVPSQAHWIVEMTKYDFTGANVYLVASVPGIHSYRSPPPCISVWNSKCGGKYFGSVEVSIVGLSHLFRTAKDSNGVELKKLAAYLGKSSDKESGMSEIVLRRNKDLQADPNAVSVLVPNPMELSEEDCVQLGFLPRTVAKWVAPLWDIGFFRFHGCVFGREAVAAAFGENNIRVRLILNVSQGPHFHNFPKMISPEHVIAFCSLIASVQRSTGLWRLEEVLRQYKWPEHLESDFTYCSSSIGTSVNAQFLSAFSSAAGKKSRQILDSEDLIQR*

Click here to download the sequence:
Link to NCBI Protein BLAST