Transcript Information: R_Transcript_56993.p1


Annotated TAIR IDAT5G54260.1
Annotated Gene NameDNA repair and meiosis protein (Mre11)
Annotated Gene Symbol(s)MRE11, ATMRE11
Annotation TypeOrtholog
Chromosome Positionchr5:22032702-22037749 | Forward length=720
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.6197315208642
Replicate 23.7256158923005
Replicate 34.7262869868265
Condition 2: 8 Hour
Replicate 15.0857848790014
Replicate 25.3826056701616
Replicate 37.6401552267378
Condition 3: 24 Hour
Replicate 17.3894455175829
Replicate 25.2180254871792
Replicate 36.1418043413027


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56993.p1 GENE.R_Transcript_56993~~R_Transcript_56993.p1 ORF type:complete len:727 (+),score=163.93,Mre11_DNA_bind|PF04152.10|7.7e-38,Metallophos|PF00149.24|2.8e-12 R_Transcript_56993:248-2428(+)
ATGGGAGAAGCATCTAGGGAGGATTTTAGCAATACTCTTAGGGTGCTTATAGCAACTGACTGCCATCTTGGATACATGGAGAAGGATGAAGTAAGGCGGCATGACTCGTTCCAGTCTTTTGAAGAGATATGCTCGATTGCAGAGCAAAAGCAGGTGGACTTCATGCTCCTTGGTGGTGATCTGTTTCATGAGAACAAGCCAACAAGGTCAACATTGGTGAGAGCTGTAGAGATTCTTCGTCGTTATTGTCTCAATGATCGTCCAGTGCAGTTCCAAGTTGTTAGTGATCAGACCTTAAACTTCCCAAACAGATTTGGTCATGTAAATTATGAGGATCCCCACTACAATGTTGGCTTACCTGTATTCACAATTCATGGCAATCATGATGATCCTGCTGGAGTGGATAATCTGTCTGCAGTTGATATTCTTTCAGCATGCAATCTTGTCAATTATTTTGGTAAAATGGATCTAGGAGGCTCTGGGGTTGGCCAAATCACTCTTTATCCCATTCTCATTCGAAAGGGTTTAACATCTGTGGCTTTGTATGGACTTGGAAACATTAGAGATGAAAGGCTAAACAGAATGTTTCAGACTCCGCATGCAGTTCAGTGGATGCGTCCTGAAGCACAAGAGGGATGTCAAGTCTCAGATTGGTTCAATATCCTAGTTCTACATCAGAATAGAATCAAGACAAATCCTAAAAATGCAGTAAATGAACATTTCTTACCTCGGTTCCTTGATTTTATAGTTTGGGGGCATGAGCACGAATGTCTAATTGATCCCCAGGAAGTTTCAGGGATGGGTTTTCATATCACACAGCCAGGTTCTTCTGTTGCCACATCACTTATTGAGGGAGAGTCAAAGCAAAAGCATGTTCTTCTCTTAGAAATTAAGGGAAATCAATATCGCCCAACCAAGATTCCTCTGCAATCAGTGAGGCCTTTTGAATATGCTGAGGTTTTGTTGAAGGATGTGCCTGACATTGATCAAAATGATCAGAACTCAATTCTTGAATATTTGGACAAAGTGGTCAGAAACCTAGTCGAAAAATCTAACAGAAAGGCGGTCGGTAAATCAGAGGGCAAGCTTCCATTGGTGCGAGTTAAGGTGGATTACTCGGGGTTCATGACTGTAAATCCTCAGAGATTTGGGCAGAAATATGTAGGGAAGGTGGCAAACCCTCAAGATATTCTGATATTCTCAAAGGCTATGCGGGCTAAAGGTCGCAGTGAAGGAAAATTTGATGCATCTGAGAAGCTACGACTCGAAGAGCTTAATCAACAGAATATTGAGGCTTTGGTTGCGGAGAGCAATCTAAAAATGGAGATCCTTCCTGTTAACGACCTGGATATTGCACTACACAATTTTGTGAGCAAAGATGACAAACTAGCTTTCCATGCTTGTGTCCAACACAATCTTGATGAAACACGCAGTAAAATTGGCAAGGAATCAGACTCGGCAAAGTTCGAAGAAGAGGATTTGGTTGTTAAAGTTGGAGAGTGTTTTGAGGAACGAATCAAAGATAGGGCAACACACCCGAAGGAGACTTTTACGTTCAGTGCACAGTCAGAGGGTTTCAGGAGTAAAGGCACTGTAGGAGCAAGCAATGCGATCTCTTTTAGTGATGATGAGGATGCTACCCAAATATCTGGGATGGGATCTACTGTTCGAGGCAGAAAAGGGACATCTGCAGCACGGGGTTCCTCTCATGATGCTTCCCAACCTGGTAAAACTTCAACAAGAGGAAGGGGAAGGGGACGAGGAAGAGGGAAAGCTAACAATAGCATGAAGCAGACTACTCTTGATGCATCTTTAGGCTTCCGCCGTTCACAAAGATCTGCATCAGTTGCTGCCTCAGCCTCTGTTCAGAGTATTGCTAACGATGAAGAAAACTTGGATTCAGCTTCAAGTGATGAAGAAGAGCAGTACGATGTCCAGGTGGTCAATGACAGTTCGGAAGATGATGAAAACATTCAAGGCAGAGGTCGCAAAAGAGCTGCACCAAGAGGAGCAGGTAGAGGTTCTACACAGCCATCCAAAAGGGGAAAAAAATCGCAAAGCTCTACACTTCAAAGGATGCTTATGGGCAAAGATGACGATGAAGATGATGATGACATTCCGAACAGACTCAACAAGTCTCAACCCAAGGTTACGAGAAATTATGGGGCTTTGAGACGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56993.p1 GENE.R_Transcript_56993~~R_Transcript_56993.p1 ORF type:complete len:727 (+),score=163.93,Mre11_DNA_bind|PF04152.10|7.7e-38,Metallophos|PF00149.24|2.8e-12 R_Transcript_56993:248-2428(+)
MGEASREDFSNTLRVLIATDCHLGYMEKDEVRRHDSFQSFEEICSIAEQKQVDFMLLGGDLFHENKPTRSTLVRAVEILRRYCLNDRPVQFQVVSDQTLNFPNRFGHVNYEDPHYNVGLPVFTIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMDLGGSGVGQITLYPILIRKGLTSVALYGLGNIRDERLNRMFQTPHAVQWMRPEAQEGCQVSDWFNILVLHQNRIKTNPKNAVNEHFLPRFLDFIVWGHEHECLIDPQEVSGMGFHITQPGSSVATSLIEGESKQKHVLLLEIKGNQYRPTKIPLQSVRPFEYAEVLLKDVPDIDQNDQNSILEYLDKVVRNLVEKSNRKAVGKSEGKLPLVRVKVDYSGFMTVNPQRFGQKYVGKVANPQDILIFSKAMRAKGRSEGKFDASEKLRLEELNQQNIEALVAESNLKMEILPVNDLDIALHNFVSKDDKLAFHACVQHNLDETRSKIGKESDSAKFEEEDLVVKVGECFEERIKDRATHPKETFTFSAQSEGFRSKGTVGASNAISFSDDEDATQISGMGSTVRGRKGTSAARGSSHDASQPGKTSTRGRGRGRGRGKANNSMKQTTLDASLGFRRSQRSASVAASASVQSIANDEENLDSASSDEEEQYDVQVVNDSSEDDENIQGRGRKRAAPRGAGRGSTQPSKRGKKSQSSTLQRMLMGKDDDEDDDDIPNRLNKSQPKVTRNYGALRR*

Click here to download the sequence:
Link to NCBI Protein BLAST