Transcript Information: R_Transcript_5700.p1


Annotated TAIR IDAT1G71980.1
Annotated Gene NameProtease-associated (PA) RING/U-box zinc finger family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:27098250-27099881 | Forward length=448
E-Value1.4E-185
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 140.268593685191
Replicate 226.475598112656
Replicate 332.149807152495
Condition 2: 8 Hour
Replicate 127.707689282409
Replicate 229.961620186325
Replicate 338.771203386528
Condition 3: 24 Hour
Replicate 138.011281703765
Replicate 228.681509916913
Replicate 335.807516878126


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_5700.p1 GENE.R_Transcript_5700~~R_Transcript_5700.p1 ORF type:complete len:456 (+),score=71.08,PA|PF02225.18|1.5e-13,zf-RING_2|PF13639.2|6.9e-11,zf-RING_11|PF17123.1|7.9e-10 R_Transcript_5700:426-1793(+)
ATGGGTGTTGGACTTGCTAGTGGAATTCAGCTGTTTCTTTTTTACTGGATATTAATGATGGTTCCCTTTTGCTCTGCTACTGTGATCTTGATGAGGCCTAATCTTACTCTCAGTTTTGAAGATATTGCGGCTAATTTTGCTCCACTTCCACAGTCCAATGGTATATGTGGAAAATTGTACATAGCAGAGCCTCTTGATGCTTGTTCTGTGTTGAAGAATGAGGTGGAGGATCTTGGGAATTGTACTGCTCCCTTTGCATTGATGATAAGAGGTGGATGCAGCTTTGAAGATAAAGTCAGGAGGGCTCAGAAGGCAGGGTTTAAAGCTGCCATTGTCTATGACAATGAGGCCAGTGGCGCTTTGGTTGCAATGGCAGGGAACTCTGCTGGTATAAAAATTCCTGCTGTATTCATTTCGAAATCCTCTGGAGAAAAATTAAAGACCTTTGCTGGCCTCGACATGGAGCTGTGGTTAATCCCAGGCAATGAAAACTCGGCTTGGTCAATCATGGCAATTTCTTTCATCTCGTTACTTGCAATGTCGGCGGTGCTGGCAACTTGTTTCTTTGTTAGGAGGCATCGCATTAGACGTGAGAGGTCTCATGCCCGAGTTCGTGAATTTCATGGGATGAGCAGTCGTTTAGTTAAAGCTATGCCAAGCTTGATATTCACAGCTGTAACAGAGGACAATTGTACATCATCAACATGTGCCATATGCCTTGAGGACTACAATGTTGGTGACAAGCTCCGGATTCTGCCATGTCGCCACAAATTTCATGCGTTGTGTGTGGATTGTTGGCTCACTTCTTGGAGAACTTTTTGTCCTGTTTGTAAACGTGATGCGCGGACCAGTACTGGTGAACCGCCGGCTTCTGAGTCTACACCATTGCTCTCATCGAATCCATCATCTGCTGCTTCTTCGCCATTGTCTTCTTTCAGGTCATCATTCAGGTCGTCCTCTGTACGTTCCTCAGCAATACAAATAGCTTCACCCAGTCCGCGATCTAATGCTGCTTCTCGCAACCAATCTATTTCAAGTAGTCCTCAAATTCCCAGGCCACTACGCTCTTATCATAATCAACATACACCTTCTATGAGTTTAAGTCAGAGCTCCGTGGATCTTAGGAATATGTCTTCTCAAAGATCATATGCTTCTCAGTTTATTTCTCCCCATTCTCTAGGTTACCCATCTCCATCACCTCTCAATACTAGGTACATGTCTACCTATTATCCAAGTCCTAGTAATGCTTCATCAAGTTATCTTGGGTCTTCTTCGATAAGACAGCCAAATCCACTGCATTATAGTGAGTCTGCAGCAAGTTTTTCTCCGTATGCTTCTGCACAATCCCTTCCTGGGGTTGATTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_5700.p1 GENE.R_Transcript_5700~~R_Transcript_5700.p1 ORF type:complete len:456 (+),score=71.08,PA|PF02225.18|1.5e-13,zf-RING_2|PF13639.2|6.9e-11,zf-RING_11|PF17123.1|7.9e-10 R_Transcript_5700:426-1793(+)
MGVGLASGIQLFLFYWILMMVPFCSATVILMRPNLTLSFEDIAANFAPLPQSNGICGKLYIAEPLDACSVLKNEVEDLGNCTAPFALMIRGGCSFEDKVRRAQKAGFKAAIVYDNEASGALVAMAGNSAGIKIPAVFISKSSGEKLKTFAGLDMELWLIPGNENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRRERSHARVREFHGMSSRLVKAMPSLIFTAVTEDNCTSSTCAICLEDYNVGDKLRILPCRHKFHALCVDCWLTSWRTFCPVCKRDARTSTGEPPASESTPLLSSNPSSAASSPLSSFRSSFRSSSVRSSAIQIASPSPRSNAASRNQSISSSPQIPRPLRSYHNQHTPSMSLSQSSVDLRNMSSQRSYASQFISPHSLGYPSPSPLNTRYMSTYYPSPSNASSSYLGSSSIRQPNPLHYSESAASFSPYASAQSLPGVDS*

Click here to download the sequence:
Link to NCBI Protein BLAST