Transcript Information: R_Transcript_57000.p1


Annotated TAIR IDAT2G16485.1
Annotated Gene Namenucleic acid binding;zinc ion binding;DNA binding
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:7137269-7145222 | Reverse length=1773
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.9119298434902
Replicate 22.8607126676198
Replicate 35.73394255417
Condition 2: 8 Hour
Replicate 16.2688779712846
Replicate 26.5608924540361
Replicate 310.352629631399
Condition 3: 24 Hour
Replicate 18.6855582477436
Replicate 25.9680580141169
Replicate 39.7093747026794


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_57000.p1 GENE.R_Transcript_57000~~R_Transcript_57000.p1 ORF type:3prime_partial len:1578 (+),score=398.29,Plus-3|PF03126.14|3.9e-21,Plus-3|PF03126.14|8.8e+03,SWIB|PF02201.14|8.7e-15,GYF|PF02213.12|1.6e-12 R_Transcript_57000:172-4902(+)
ATGAGAAGCTTAAAAATGGCGGATAAGCGCCTCACTAGGACTACTGTTCAAGCTCTAGCTAGCGTTGACAAGCTTGTTGTTTCTCCTCCGACTCTAACTCCAAGTCTTGATCAACCTTCAATTCCTCCTAAATTGCCCGATTCTCAGCTCCTCGGAGCTCCAGTTACTCCTCCTGATGGTCAAATGTCGGAGATTGTCGTCAAGAAGAAACGTGGTAGGCCCCCTAAGAACCACGGGATGATGTCAGCCGCTGCTTCTTCTTCTGTTGCGGCCACTAGTACTAGTAATATTGCTAATAAGAGGACTAAGAAGGAAGAAGAGGATGTTTGTTTTATCTGCTTTGATGGCGGGAGTCTCGTTCTTTGTGACAGACGGGACTGCCCTAAGGCTTATCATCCTGCTTGTGTTAAACGAGACGAGTCGTTCTTTCGGCCTAGTATACGCTGGAATTGTGGTTGGCATTTGTGTAACAGCTGCCAGAGAAATGCTCTTTTTATGTGCTATACATGCCCTTACTCCTTATGTAAGGGATGTGTTAAGCAGGCTGATATCTTTTGCGTCAGAGGGAACAAAGGATTCTGTAAGACATGCATGACAACTATTATGTTAATTGAAAATATCCCCCAGGAAAACAAGGAATTGGTTCAAGTAGATTTTGATGACGCAACTAGCTGGGAATACCTTTTCAAGGTATATTGGGTTTTGTTGAAACAGAAGGAATCTTTTACCTTAGATGAGCTCACTCGTGCTACTAATCCCTGGAAAGCACCTGGACCGGAAGACAAGGATCAGTTTCCGCAGAAAATACAGGATATGTGTGTCAGCAATGTTGCTGAGCCGAGCAGTACTGTACATGTGGGAGCAAATTCTTCAAAAAGAAGAAAGACCAGAAAACAGTTTCATTCATTTAATGTAGATTTGCAGAAGGTGGATAAATCAGATGGGGAAAAGGTTTCGTGCTTGCATGAAAGAGCTGATTGGGCATCTAAAGAACTGCTGGAGTTTGTTGCACACATGAAAAACGGTGATACATCAGTTCTATCCCAGTTTGATGTCCAGGCCCTTCTGCTGGAGTATATAAGGGCTAACAATCTTCGTGATCCTCGTCGAAAATGTCAAATTATTTGTGATAAGAGGTTGGAGAATTTGTTTGGTAAATCAAGAGTTGGTCATTTTGAAATGCTAAAGCTGCTAGAGTATCATTTCAAGGAAGAATCCCGCACCAATGGTGTGATTCGTGGAGCAGCTATCGGTTCTCTTACTGGTCAGCTGGAAGATGAGGGTTTTCACGGAAATACTCAGGCAACAAGCAGAGAAACGAGACGGCAAGCTCGTAGAAAGAGTGATGAAAAAATCAGGCAAAATAATCTGGACAGTTATGCAGCAATTGACGTCCACAACATTAATTTGATTTACCTTAAACGCAGTTTGATGGAAAAACTTGTGGTAGATGCAGGAAATTTTCATGATAAAGTTGTTGGTTCAATTGTTAGAATTAGGATATGTAGTAATGATCAAAAGCAAGACATGTATCGTTTGGTCCGTATCATAGGTACAGGCAAAGCAACTGAGCATTATAAAACTGGTGAGAAGACAGGGAATATCATGCTAAAGATATTAAATCTAAACAAGATAGAGGACATTTCGATTGAGGCAATTTCAGATCAAGAGTTTTCTGAGGATGAGTGCAGACGTTTACGCCAGAGTATAAAGCTGGGGCTTGTTGAGAGGATGACCGTGGGTGAAATCCAGGACAAAGCGGTGGCACTTCAGACAGTGAGGGTTAATGATTGGCTTGAAACAGAGATAATGAAGCTTAATCATCTCCGGGATCGGGCTAGTGAGATGGGGCATCGGAAGGAGCTTAGAGAATGCGTGCAGAAACTTGAGCTCCTGAAAACACCTGAAGAGCGTCTACGTAGGATAAATGAAATTCCAGAAGTACATGCAGATCCAAGGATGGATCCTAGTTATGGTTCTGATGATGATTCTGGAGAATCATATGTAAAGAAGCAAGATGGATCTATGCCACCAAAATACTCTAGTTCCAATTCAAAGGGTATGGAGTTGATTTCTCCCTTAAGAGGGGGGGATATATCAAAAGATGACAGAGCCAAATCACCGAAAAACTCGGCTGTGAATGGGGAGCGTAAGAGAAAAGTCTCTGCTAGATTTCATGTAGGCAAAGTGGAAGATACTGCAAGACCTATTGTATCCTCCCTGAAATCTCCATCTAAAGTCTTGGAAGAACTCAGTAGTGAAGCTGATTTAGGGGTTGGTGCTGTTCATCATGTTGCGAAAATTGGATCCATGTCTCAGTCTACCCCTGATACTCCCTCCACAGGAATGGTGCTTGTTTCTGATATTACTGAACTTGAGAAAATTTGGCACTATCAAGATCCATCAGGCAAAGTACAAGGACCATTTTGCATGCTGCAGCTGCGCAAGTGGAATTCCAACGGTTTTTTCCCTACTGATTTGAGAGTATGGAGGATTAATGAAACCCAGGAACAATCAATACTTTTGAATGTTGCATTGAAGAAGCAGCAGCTTGCTAGTGAACCTCTTTCTGAACAACATACATCTTTACAGTCCAATGTTGGAGCTCCTGATAATGACGAAAAAGTTACTTCTGTTGAGGAGCTGAGCTCTAATGCACCTTGGATAGGCCATAGGGCAACTGATGAAGACAGTAATTCAAACTTGACCAATAAACCTACAAGTTCTCATGGTGATGAACAGTCTTTGAGTGATCACAATAGTCAGCAAGTATCTAATGATCAAGGTGGTGCAGAATCTTCTGGATTGAATATAAATGCTCACCCACCAGACAGTTCTATCTCTAGGGAACTCAGTTCAGGTGCTCGTTCAGGCACCAGTCCTCTTGAGACCTTGAAGATGACCCCTAAAACTGAGCCTGCAGATCAATCTAGTCCCACACCAAAGTCTGAAAATGTGAATATGGGAGCTCAGGCTGTCAACAATGGACCTTCCAGCCCATATACAGGTGCAGATTCTGCAGCTATCTGTGGCATGACATCTAATGGAGCTGAGGCGTCTATTCCAAGTCCCGTGCCAAAATCTGGATCTGAGGTTGGGCACAGTCCAGAATTTGAGAATAAAGATCCTATCACTTCAGGTATTAGTAAAGATATAGGTGATAGCTGGGGAACTAGATCCAGGGCAATTCCGGATACGCCAAGTCCTACATCAAAGACAGGAAATAATGTTGTGAAGGATCATGATACAGACAATAATCATTCTGCTTCTTCAGCTGAGCATGATACAGTTAAAAATAGTACAGTTCTTGATGGAGGTGGTGTTTCTATGCTCCCAAGCACAGTTCCAGAGGAGGACAATGAAGCTTTGAGACCTCATGCTGCAGAAGATAGACACATTATTGCATCAAATGTCCCTGGAGAAGTTTCTGGTGCCAGCTTGATTACTGGCAATGAGGGAACTAATGTCTCTGCTCTGCCAAGAACTACACCAAATAGCAAAGATATGAAATCACATGCTGCAGAAAATAAACACTATGTTGCTTCTACAGTTCCGGGACAGGATTCAGGCACAAGCTGGAGTACAATGTCTGGCGGAGTTGTGTTTCCTGATACGCCTGGTCCTGCTTCAAATTCAGAGAGTGAGGGCTTGAAAATTACTGATCATAAACAGTATGATGCTGCAAACAATCATGGTCATGATTCAGGCACTAGCTGGAGTACTATTTCTAGAGCAGTTGGGTTTGCTGATCCTCCTGCTACCTCACTGAAGGATGATGAGGCAACAAGAGGTCATGCAGTGGAAAATCAGCATTGTGTGACTCCAAATATTCCTGGGCAAGATTCGTGTATTAGTTGGAGCACTACCTCCAGCCTAGTAGGTGAAGTACATCTCCCTGATGTAGCTAGTGAGTGGGCTGCATATTCCACTGTGCAAGCAAAATCATCTGTTCATGATTTTCACTCAGGTCTAGTGTCTGGCTCATCAACGCAGCTGGTTGATATTGCCAGTAACCATGCTACCCCAACTTCTGATGGCTGTCAGTTGACTCATTCTTCCCCGAACCATCCCGATATTGATATTTCAGGCTGGCAGCCCATTGAGCTCAGCACTTTAGGTGATGAATCTGTTTCAGATTTGTTGTCTGAAGTTGAGGCGATGGAGTCTCTAAGGGGCATGTCATCCCCAACTTCAAGGATGCATTGTGGTGATGACTCAATTGACTCTCCAAGGGATGATTGTTTTAGTCCCCTTGACGGTCTGAGTCCAAATATCGATCCTGGGAAAAATGATGCCTTGAGTTCGACGGCTGAACTTCATTTCCACATCCAGCCTACCCACCACTTAAATCAGCAGCAGGGGATGTTTTCAGTTGATGTCCATGATCTCCCGAGGTCCTCTTCTGTTTTCTCTATCCCAGCCCCTGAAGTCGAGGGAGTAATGAAGCCATCCATTGTTTGTATGCCTCACCATAACATAGCTTCTCAAGCTCCACCGCCTACATTGCTGCCTCCACCGCTGACTTCTCCTCCACCACCTCCTCCACCAGCATCTCCTCCACCGCCGCCACCGAAACCACCATCGCCACCTCAACAACCACCACCACCAACTCCACCTCAACAACAACCACCATCAACACCATCTCAACAACCATCACCACCACCACCACCACCACCTCAACAACCATCACCACCACCACCACCACCACCTCAACAACCATCACCACCACCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_57000.p1 GENE.R_Transcript_57000~~R_Transcript_57000.p1 ORF type:3prime_partial len:1578 (+),score=398.29,Plus-3|PF03126.14|3.9e-21,Plus-3|PF03126.14|8.8e+03,SWIB|PF02201.14|8.7e-15,GYF|PF02213.12|1.6e-12 R_Transcript_57000:172-4902(+)
MRSLKMADKRLTRTTVQALASVDKLVVSPPTLTPSLDQPSIPPKLPDSQLLGAPVTPPDGQMSEIVVKKKRGRPPKNHGMMSAAASSSVAATSTSNIANKRTKKEEEDVCFICFDGGSLVLCDRRDCPKAYHPACVKRDESFFRPSIRWNCGWHLCNSCQRNALFMCYTCPYSLCKGCVKQADIFCVRGNKGFCKTCMTTIMLIENIPQENKELVQVDFDDATSWEYLFKVYWVLLKQKESFTLDELTRATNPWKAPGPEDKDQFPQKIQDMCVSNVAEPSSTVHVGANSSKRRKTRKQFHSFNVDLQKVDKSDGEKVSCLHERADWASKELLEFVAHMKNGDTSVLSQFDVQALLLEYIRANNLRDPRRKCQIICDKRLENLFGKSRVGHFEMLKLLEYHFKEESRTNGVIRGAAIGSLTGQLEDEGFHGNTQATSRETRRQARRKSDEKIRQNNLDSYAAIDVHNINLIYLKRSLMEKLVVDAGNFHDKVVGSIVRIRICSNDQKQDMYRLVRIIGTGKATEHYKTGEKTGNIMLKILNLNKIEDISIEAISDQEFSEDECRRLRQSIKLGLVERMTVGEIQDKAVALQTVRVNDWLETEIMKLNHLRDRASEMGHRKELRECVQKLELLKTPEERLRRINEIPEVHADPRMDPSYGSDDDSGESYVKKQDGSMPPKYSSSNSKGMELISPLRGGDISKDDRAKSPKNSAVNGERKRKVSARFHVGKVEDTARPIVSSLKSPSKVLEELSSEADLGVGAVHHVAKIGSMSQSTPDTPSTGMVLVSDITELEKIWHYQDPSGKVQGPFCMLQLRKWNSNGFFPTDLRVWRINETQEQSILLNVALKKQQLASEPLSEQHTSLQSNVGAPDNDEKVTSVEELSSNAPWIGHRATDEDSNSNLTNKPTSSHGDEQSLSDHNSQQVSNDQGGAESSGLNINAHPPDSSISRELSSGARSGTSPLETLKMTPKTEPADQSSPTPKSENVNMGAQAVNNGPSSPYTGADSAAICGMTSNGAEASIPSPVPKSGSEVGHSPEFENKDPITSGISKDIGDSWGTRSRAIPDTPSPTSKTGNNVVKDHDTDNNHSASSAEHDTVKNSTVLDGGGVSMLPSTVPEEDNEALRPHAAEDRHIIASNVPGEVSGASLITGNEGTNVSALPRTTPNSKDMKSHAAENKHYVASTVPGQDSGTSWSTMSGGVVFPDTPGPASNSESEGLKITDHKQYDAANNHGHDSGTSWSTISRAVGFADPPATSLKDDEATRGHAVENQHCVTPNIPGQDSCISWSTTSSLVGEVHLPDVASEWAAYSTVQAKSSVHDFHSGLVSGSSTQLVDIASNHATPTSDGCQLTHSSPNHPDIDISGWQPIELSTLGDESVSDLLSEVEAMESLRGMSSPTSRMHCGDDSIDSPRDDCFSPLDGLSPNIDPGKNDALSSTAELHFHIQPTHHLNQQQGMFSVDVHDLPRSSSVFSIPAPEVEGVMKPSIVCMPHHNIASQAPPPTLLPPPLTSPPPPPPPASPPPPPPKPPSPPQQPPPPTPPQQQPPSTPSQQPSPPPPPPPQQPSPPPPPPPQQPSPPP

Click here to download the sequence:
Link to NCBI Protein BLAST