Transcript Information: R_Transcript_5703.p1


Annotated TAIR IDAT1G71980.1
Annotated Gene NameProtease-associated (PA) RING/U-box zinc finger family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:27098250-27099881 | Forward length=448
E-Value6.9E-114
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.4674083534054
Replicate 22.5586889396205
Replicate 32.2167810576922
Condition 2: 8 Hour
Replicate 11.4919702656028
Replicate 23.1257146659722
Replicate 33.5132149587846
Condition 3: 24 Hour
Replicate 14.2788744653785
Replicate 21.501971035559
Replicate 32.8242199595997


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_5703.p1 GENE.R_Transcript_5703~~R_Transcript_5703.p1 ORF type:complete len:279 (+),score=51.27,PA|PF02225.18|5.4e-14,zf-RING_11|PF17123.1|2.2e-06 R_Transcript_5703:426-1262(+)
ATGGGTGTTGGACTTGTTAGTGGAATTCAGCTGTTTCTTTTTTACTGGATATTAATGATGGTTCCCTTTTGCTCTGCTACTGTGATCTTGATGAGGCCTAATCTTACTCTCAGTTTTGAAGATATTGCGGCTAATTTTGCTCCACTTCCACAGTCCAATGGTATATGTGGAAAATTGTACATAGCAGAGCCTCTTGATGCTTGTTCTGTGTTGAAGAATGAGGTGGAGGATCTTGGGAATTGTACTGCTCCCTTTGCATTGATGATAAGAGGTGGATGCAGCTTTGAAGATAAAGTCAGGAGGGCTCAGAAGGCAGGGTTTAAAGCTGCCATTGTCTATGACAATGAGGCCAGTGGCGCTTTGGTTGCAATGGCAGGGAACTCTGCTGGTATAAAAATTCCTGCTGTATTCATTTCGAAATCCTCTGGAGAAAAATTAAAGACCTTTGCTGGCCTCGACATGGAGCTGTGGTTAATCCCAGGCAATGAAAACTCGGCTTGGTCAATCATGGCAATTTCTTTCATCTCGTTACTTGCAATGTCGGCGGTGCTGGCAACTTGTTTCTTTGTTAGGAGGCATCGCATTAGACGTGAGAGGTCTCATGCCCGAGTTCGTGAATTTCATGGGATGAGCAGTCGTTTAGTTAAAGCTATGCCAAGCTTGATATTCACAGCTGTAACAGAGGACAATTGTACATCATCAACATGTGCCATATGCCTTGAGGACTACAATGTTGGTGACAAGCTCCGGATTCTGCCATGTCGCCACAAGTTGCAAATATGCTTCTACAGGCCAAGTGGCCAATATATTGAACGACTATGCGAGGGGTGGCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_5703.p1 GENE.R_Transcript_5703~~R_Transcript_5703.p1 ORF type:complete len:279 (+),score=51.27,PA|PF02225.18|5.4e-14,zf-RING_11|PF17123.1|2.2e-06 R_Transcript_5703:426-1262(+)
MGVGLVSGIQLFLFYWILMMVPFCSATVILMRPNLTLSFEDIAANFAPLPQSNGICGKLYIAEPLDACSVLKNEVEDLGNCTAPFALMIRGGCSFEDKVRRAQKAGFKAAIVYDNEASGALVAMAGNSAGIKIPAVFISKSSGEKLKTFAGLDMELWLIPGNENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRRERSHARVREFHGMSSRLVKAMPSLIFTAVTEDNCTSSTCAICLEDYNVGDKLRILPCRHKLQICFYRPSGQYIERLCEGWL*

Click here to download the sequence:
Link to NCBI Protein BLAST