Transcript Information: R_Transcript_57193.p1


Annotated TAIR IDAT1G08600.3
Annotated Gene NameP-loop containing nucleoside triphosphate hydrolases superfamily protein
Annotated Gene Symbol(s)ATRX
Annotation TypeOrtholog
Chromosome Positionchr1:2724562-2733431 | Forward length=1479
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.338420147027
Replicate 22.418348849547
Replicate 33.2789271525784
Condition 2: 8 Hour
Replicate 12.6898586659757
Replicate 22.694620248505
Replicate 34.3143308864701
Condition 3: 24 Hour
Replicate 14.5395930403649
Replicate 22.8046301252332
Replicate 34.4300014812362


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_57193.p1 GENE.R_Transcript_57193~~R_Transcript_57193.p1 ORF type:complete len:1502 (+),score=412.75,SNF2_N|PF00176.19|2e+02,SNF2_N|PF00176.19|3.8e-52,Helicase_C|PF00271.27|1.2e+04,Helicase_C|PF00271.27|1.1e+02,Helicase_C|PF00271.27|8.8e+03,Helicase_C|PF00271.27|7.3e-15,ResIII|PF04851.11|9.2e-08 R_Transcript_57193:309-4814(+)
ATGGAAGAGAAGCCCAATGAGGTGGAAGATAACAATAATGATGATGATAATAATAATAACAATGAGGTAGCCGAAGAAATAGTCCAGGATTCGGAGGATTCTTTTATACATGATTCGAGCGATGATGAGGACGCAGAACTTGCTTCAGAAGGAGGCAGCTCACAACTAGAGGGGCTTCTTACTGAAGAAGAAATAGAAGAATTGATTGCGGAACTACTAGAAGTTGAGAGCAAGGCTGCAGAGGCTCAAGAAACACTGGAAAAAGAGTCCTTGGAAAAGGTTGAGCGAGACGTGAGAGAAGAGTTGGCTGAGACTCTCCAAGGAGATGATCTGGAGAGGGCAGTGGCAGATGAAATGGCAACGTTTAGAGAAGAGTGGGAGGAATCTCTGGATGAGCTGGAGACAGAGAGTGCTCATTTATTGGAGCAACTTGATGGTGCTGGTATTGATCTGCCAAGCCTCTACAAATGGATAGAGAGCAGGGCACCAAATGGTTGTTGCACTGAAGCATGGAAAAAGAGGACTCACTGGGTAGGATCTGAGATCACCAATGATGCTGTGGATTCAATCAGAGATGCTGAGAAGCATCTTCAGATGGAAAGGCCTATAAGGAGACGACATGGTAAAATCTTAGAGGAGGGTGCTAGCGGATATCTTGGGAAAAAAGTCGCCGTTGATGATAGCGTTGAGGGTCTAAGTAAGAATGCTGGGGTTGACTGGAGCTCTTTCACCAAATTATTTTCTCAACAGTCATCGCAGGAAGGCATTACCTTTGGTAGCGAGCAATGGGCTTCCGTATACTTGGCCAGTACTCCTCAGCAGGCTGCAGCTATGGGACTTAAATTTCCTGGGGTAGATGAGGTTGAGGAGATTGATGAGATTGATGATGACCTGAGTGATCCATTTGTTGCTGATGCTTTAGCAAATGAGAAAGAGCTGGATCTTTCTGAAGAGCAAAGGAAGAAATATAGAAAGGTCAAAGAGGAAGATGACAAGAATGTTGATCAGAAGCTTCAACTTCATTTGAAGCGAAGGAGACGTAGAGAAAGGAGTAAGCAGGTGGCAAGGGGGAAAGCATTAGAAGTTGACGGGTTCCTGACATGCAGTATGCAAAATTCAGTTGAGGAAAATGATACTGCTGAAGGTGCATCTAGTGGTAATGCATTTAGGGAAGAGAACTATTTTAACGGTGATTCTTCTGAGGTTTTGTTACCTCAGACAGTTGAACCTAGCCAGGGCTCAAAGCGTTTACGTGATGACGAGGAGGTCAACACTGAAGCTAAGAGACGTCAGTTGGTTATCCCCGATAATGATAATGAAGCACAAATTATGGAAAATGATCATGATTTTATTGTTAACGATGGTGCTGATGTAGAGAATAAAGTTACTGCTCAAGAAAATGGTAATGAATCCAGTGATGTTGATACTGCTCAAGAAAACGGTGACAAGTCAAGTGATGTGAAGTTCCAGTGCACTGCTTGTGGTAAAGATATGAATGATGTGCAGCAACATCCACTTCTAAAAGTAATTGTTTGCACGGATTGCAGAAGTGCTGTCGAGGCAAAGATGAGGACAAAGGATGCTAATTTCACTGAGTGTTACTGTGGATGGTGTGGAGGCAATAATGACCTGATAAGTTGTAAATCATGTACAACTTTATTTTGTATGTTATGTATAAAGAGGAACATTGGAGTAGAATGCTTATCAGAAGCAAAATCGGATGGCTGGAAATGTTGTTGTTGTTCCCCAAATCTTCTACAGCATTTGACCTTGAAACTAGACGAAGCCTTGGGCTCCCAAGATTCAACAAGTTCAAGTTCTAGTTCTGACAGTGATACAGGAAATTCAGACGATGATATTAGCGTTCCAATCAGCTCGAAGAAGAAGAAGAAAATTCGAAGAATTCTTGATGATACTGAGCTTGGAGAAGAGACAAAGAAGAAGATTGCCTTGGAAAAGGAGCGTCAGGAACGGCTCAAGTCTCTGAAAGCCCAGTTTTCAGGCATATCTATGATGATGAATGCATCTAAGTATCATGGCAGTTTACCTGAAGGCGCTAATATTGAAGTCCTTGGTGACGCATCAACTGGTTATATTGTGAATGTTGCTAGGGAAGAAGGGGAAGATGCTGTAAGGATTCCTCCAAGCATCTCTGCCAAATTGAAAAAGCACCAGGTTGCAGGAATTCGGTTTATGTGGGAAAACATCATCCAGTCTATCCGAAATGTGAAGGCTGGGGATAAAGGCCTTGGCTGTATTTTAGCTCATACGATGGGTCTCGGCAAAACATTCCAGGTCATAGCTTTCTTATACACTGCAATGAGAACTGTTGACTTAGGTCTGAAATCAGCGTTGATTGTTGCACCAGTGAATGTGCTGCACAATTGGCGGCAGGAGTTTAGAAAGTGGGAACCCAAGGAATGCAAGCCTCTTCGTGTTTATATGTTGGAAGATAAACCAAGGGAGCAGAGGGCAGAGTTGCTGATGAAGTGGAGAACAAAGGGTGGTGTATTCTTGATTGGTTATACTGCATTTAGAAATTTATCCCTTGGAAAAAATGTGAAGGACCGACAGACAGCAAAAGACATTTGCTATGCGCTTCAGGAAGGACCAGACATTCTTGTATGTGATGAGGCCCATATGATCAAGAACACTAGGGCGGATACTACCCAAGCTTTAAAGCAAGTAAAATGCCAGAGAAGGATTGCATTGACAGGGTCGCCTCTTCAGAACAACCTGATGGAGTACTACTGTATGGTTGATTTTGTAAGGGAAGGATTACTTGGAAGCATGAATGAATTTCGCAACCGTTTCCAGAATCCTATAGAGAATGGACAACATGCAAATTCCACAGCAGATGATGTGAGAATTATGAATCAGAGGTCGCATATTCTGTATGAACAACTAAAAGGGTTTGTCCAGAGAATGGACATGAGTGTGGTGAAGAATGACTTGCCTCCTAAAACCGTGTTTGTTATAGCTGTGAAGCTTTCTTCGCTTCAAAGGAAATTATACAGAAAGTTTCTTGATGTTCATGGATTCACTAGTGGCAGAGCTTCTTATGAAGGAATTAAGAAGAAATCCTTTTTTGCTGGGTATCAGGCCTTAGCCCAGATATGCAACCATCCTTGGATTTTGCAATTGATGAAAGATAGACTGTATGGAAAACGTGAAGATACTGTTGAGAGTGTTGTTCCAGATGCTAGCTCCAGTGATGAAAATATGGATTCGAATGTGGTGATTGGAGAGAAGGGAAAGACAGGGAATGACTTCACTGTTGGGAAGAATACTGGCTTCCTTCTTGAGGGCTGGTGGAACGGTCTTCTTAGTCCAGATAAGCACCGGGAAATTGACTTCAGTGGCAAAATGGTTTTGTTGCTTGACATTGTAACGATGTGCACTGAAATGGGTGATAAAGCATTGGTTTTCAGCCAGAGCATACCGACTTTGGATCTGATAGAATCATATCTGTCAAAATTGGTTCGGCACGGTAAGAAGGAAAAACTCTGGAAACGCGGAAAAGATTGGTACAGAATTGATGGGAAGACAGAAGGCTCTGAAAGGCAGAGGCTTGTTGATGCATTTAATGACCCTCAGAATAGGAGAGTGAAATGCACTCTTATATCAACCAGAGCCGGAGCATTGGGTATTAATCTTTTTGCAGCCAATCGTGTGATCATCGTTGATGGGTCCTGGAACCCGACATATGATCTTCAGGCTATATACCGGGCTTGGAGGTATGGTCAAACAAAGCCTGTCTATGCTTACCGATTAATGGCACATGGGACTATGGAAGAAAAAATATACAAGCGTCAGGTGCAAAAGGAGGGTCTTGCAGCAAGGGTTGTTGATAGACAACAAGTTCACAGGAGTATGTCTAAAGAAGAGATACTACATCTCTTTGAATTTGGTGATGATGAGAACCTTGATATTTTGCCTGAGATGGAAGAGAAAAATGGGGATGCCGATACAACTATGAGCAGCAAAGTTGACAATATGCTGAAGCAGAATTCTTCTATTTGTCCTGAAAGCTGTTCTTCTGATAAGTTGATGGAAATTATGCTCAGTCGACATCGTCTGAGATGGATTATGAATTACCATGAGCATGAGACACTTTTGCAAGAGAATGAAGAGGAGAAGCTCTCGAAAGAAGAACAAGACATGGCATGGGAAGTATTCAGGAGAAGTATGGACTGGAAGGAAGTGCATAAGGTACCTGCTGATGACTCGGGAATAGAGTGGCTGGAAGTTCGTAGGGTTCCTGCTGATTTATCAGAATTCGACCACAAGGGAAACAATTCAAATAGGTCATCCATTGCACAAGAGAGAAACAGTATGCCTGAACCTGTGGTGAATATTAGGACTCGTGTTCCATCAAGGAAATGCACCAATGTGTCTCACTTGCTAACTTTGAGGAGCCAGGGAATAAAAGTTGGTTGCAGTACTGTTTGTGGGGAATGCGCCATAGAGATCAGTTGGGAGGACCTTAATAGGGACAAGAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_57193.p1 GENE.R_Transcript_57193~~R_Transcript_57193.p1 ORF type:complete len:1502 (+),score=412.75,SNF2_N|PF00176.19|2e+02,SNF2_N|PF00176.19|3.8e-52,Helicase_C|PF00271.27|1.2e+04,Helicase_C|PF00271.27|1.1e+02,Helicase_C|PF00271.27|8.8e+03,Helicase_C|PF00271.27|7.3e-15,ResIII|PF04851.11|9.2e-08 R_Transcript_57193:309-4814(+)
MEEKPNEVEDNNNDDDNNNNNEVAEEIVQDSEDSFIHDSSDDEDAELASEGGSSQLEGLLTEEEIEELIAELLEVESKAAEAQETLEKESLEKVERDVREELAETLQGDDLERAVADEMATFREEWEESLDELETESAHLLEQLDGAGIDLPSLYKWIESRAPNGCCTEAWKKRTHWVGSEITNDAVDSIRDAEKHLQMERPIRRRHGKILEEGASGYLGKKVAVDDSVEGLSKNAGVDWSSFTKLFSQQSSQEGITFGSEQWASVYLASTPQQAAAMGLKFPGVDEVEEIDEIDDDLSDPFVADALANEKELDLSEEQRKKYRKVKEEDDKNVDQKLQLHLKRRRRRERSKQVARGKALEVDGFLTCSMQNSVEENDTAEGASSGNAFREENYFNGDSSEVLLPQTVEPSQGSKRLRDDEEVNTEAKRRQLVIPDNDNEAQIMENDHDFIVNDGADVENKVTAQENGNESSDVDTAQENGDKSSDVKFQCTACGKDMNDVQQHPLLKVIVCTDCRSAVEAKMRTKDANFTECYCGWCGGNNDLISCKSCTTLFCMLCIKRNIGVECLSEAKSDGWKCCCCSPNLLQHLTLKLDEALGSQDSTSSSSSSDSDTGNSDDDISVPISSKKKKKIRRILDDTELGEETKKKIALEKERQERLKSLKAQFSGISMMMNASKYHGSLPEGANIEVLGDASTGYIVNVAREEGEDAVRIPPSISAKLKKHQVAGIRFMWENIIQSIRNVKAGDKGLGCILAHTMGLGKTFQVIAFLYTAMRTVDLGLKSALIVAPVNVLHNWRQEFRKWEPKECKPLRVYMLEDKPREQRAELLMKWRTKGGVFLIGYTAFRNLSLGKNVKDRQTAKDICYALQEGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGLLGSMNEFRNRFQNPIENGQHANSTADDVRIMNQRSHILYEQLKGFVQRMDMSVVKNDLPPKTVFVIAVKLSSLQRKLYRKFLDVHGFTSGRASYEGIKKKSFFAGYQALAQICNHPWILQLMKDRLYGKREDTVESVVPDASSSDENMDSNVVIGEKGKTGNDFTVGKNTGFLLEGWWNGLLSPDKHREIDFSGKMVLLLDIVTMCTEMGDKALVFSQSIPTLDLIESYLSKLVRHGKKEKLWKRGKDWYRIDGKTEGSERQRLVDAFNDPQNRRVKCTLISTRAGALGINLFAANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVYAYRLMAHGTMEEKIYKRQVQKEGLAARVVDRQQVHRSMSKEEILHLFEFGDDENLDILPEMEEKNGDADTTMSSKVDNMLKQNSSICPESCSSDKLMEIMLSRHRLRWIMNYHEHETLLQENEEEKLSKEEQDMAWEVFRRSMDWKEVHKVPADDSGIEWLEVRRVPADLSEFDHKGNNSNRSSIAQERNSMPEPVVNIRTRVPSRKCTNVSHLLTLRSQGIKVGCSTVCGECAIEISWEDLNRDKK*

Click here to download the sequence:
Link to NCBI Protein BLAST