Transcript Information: R_Transcript_57199.p1


Annotated TAIR IDAT3G51700.1
Annotated Gene NamePIF1 helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19179443-19181145 | Reverse length=344
E-Value1E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.2186671488478
Replicate 212.725030555332
Replicate 312.263202955516
Condition 2: 8 Hour
Replicate 17.6672910440869
Replicate 26.3242898136687
Replicate 311.184325735794
Condition 3: 24 Hour
Replicate 112.754337348724
Replicate 29.802337284701
Replicate 311.496572158774


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_57199.p1 GENE.R_Transcript_57199~~R_Transcript_57199.p1 ORF type:5prime_partial len:99 (+),score=10.65,Herpes_Helicase|PF02689.10|4.3e-07,UvrD_C_2|PF13538.2|6.8e-06 R_Transcript_57199:3-299(+)
CTAGCATCATCAAGCCCCATCACCTATCCATATAGATTTGAAAGACGACAATTTCCAATCAAACTTAGCTTCGCGATGACAATCAACAAGTCTCAGGGGCAAACACTCAGTAATGTTGCTGTGTACCTTCGAAAGCCGTGTTTTTCACATGGCCAGCTCTATGTTGCGCTGTCTAGAGCAAAGAAAGCAAGTTGTGTCAAAGTCTTTATTGATGAAGAAAAACAAACTGATCCAGACAGAGATATTGTTACCAATGTCATTTCCTTCGATTTGCTTCAAAAGGCCGGAATCCTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_57199.p1 GENE.R_Transcript_57199~~R_Transcript_57199.p1 ORF type:5prime_partial len:99 (+),score=10.65,Herpes_Helicase|PF02689.10|4.3e-07,UvrD_C_2|PF13538.2|6.8e-06 R_Transcript_57199:3-299(+)
LASSSPITYPYRFERRQFPIKLSFAMTINKSQGQTLSNVAVYLRKPCFSHGQLYVALSRAKKASCVKVFIDEEKQTDPDRDIVTNVISFDLLQKAGIL*

Click here to download the sequence:
Link to NCBI Protein BLAST