Transcript Information: R_Transcript_57282.p1


Annotated TAIR IDAT3G54860.2
Annotated Gene NameSec1/munc18-like (SM) proteins superfamily
Annotated Gene Symbol(s)ATVPS33, VPS33
Annotation TypeOrtholog
Chromosome Positionchr3:20324286-20329841 | Reverse length=608
E-Value5.6e-313
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 138.680351821829
Replicate 224.237340077874
Replicate 330.17078693453
Condition 2: 8 Hour
Replicate 126.868717576339
Replicate 227.463364945886
Replicate 333.105370376444
Condition 3: 24 Hour
Replicate 130.122492033666
Replicate 227.125007997975
Replicate 331.839999938825


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_57282.p1 GENE.R_Transcript_57282~~R_Transcript_57282.p1 ORF type:complete len:596 (+),score=117.01,Sec1|PF00995.19|1.9e-92 R_Transcript_57282:328-2115(+)
ATGGCTCAAATCCCAAATTTAGACAATGCTCCCATTAATCTGGCTTCTTTCAGAGAGCAATCACAGAAAGAGCTGATAACCATTTTAAAAAATATCCGAGGTAAAAAATGTCTTGTCATCGATCCAAGGCTTAGTGGCTCTCTCTCTCTAATTGTCCAGACTTCTGTTCTCAAGGAACATGGAGTGGAATTGCGCCATTTATCTGCAGAACCTCTAGAAACTGAATGTAGCAAAGTTGTGTACCTTGTTTGTGCTCAACTTGATTTGATGAGACATATTTCGTTGCATATTCATGACAGTACAACAAAAGGTCTACAAAGGGAGTGTTCTGTTTACTTTGTACCAGGACGTTCAGTTGCATGTGAGCAGTTATTGAAAGAGGAGAAAGTACATGACTTGTTGACCATAGGAGAATTTCCATTATACATGGTCCTGTTGGATGAGGATGTAATATCATTTGAACTGGACTTTGCATACAAGGAGTGTCTAGTTGATGCTGATACAAGCTCTCTTTGGCATATTGCAAAAGCCATTCATAAGCTTGAGTTGTCATTTGGTATGATCCCAAACGTGAGGGCAAAAGGCAAGGCTTCACTTCGTGTTGCAGAGATCCTAGATAGGATGCAGATAGAAGAGCCAGTCAGCATATCAGATATGATGCCGGAGATAAGTACAGTGATCTTGCTAGACAGAGAGGTAGACATGGTCACTCCGATGTGTTCACAGTTGACATATGAAGGCTTGTTGGATGAGATATTACATGTGAATAATGGGGCAGTGGAGCTTGATGGATCTATCATGGGTGTGCAGCAGGAGGGAAGAAAGGTTAAAGTTCCACTAAATTCAAGTGACAAACTCTTTAGGGAAATTCGAGATCTTAACTTTGAAGTTGTTGTCCAGGTCCTACGTCAAAAGGCAACATCAATGAAACAAGACTATACTGATATTACAAAAATGAATCAGTCTGTTTCTGAACTAAAGGACTTTGTCAAGAAACTGAATTCTTTACCAGAGATGACTAGGCACATAAATCTTGCTCAACATCTGTCCACGTTTACATCCAAACCAGCATTTCTTGGCCGTCTTGATATGGAGCACACAATTGTTGAGTCCGAAAGCTATGATATATGCTTCGAGTATATTGAAGAAATGATCCACAAGCAAGAACCTCTTGTTAGTGTCCTTAGGCTTCTTGTTTTACTTTCTGTTACAAATTCTGGGTTGCCTAAGAAACATTATGACTATTTGAGGAGGGAGCTACTTCACAGCTATGGATTTGAGCACGTGGCAACACTGAATAGTTTGGAGAAGGCTGGGTTATTCAAAAAGCAGGAATTGAGAAGCAATTGGTTGACGATTAAACGAGCTCTTCGCCTTGTAGTTGAAGATACTGATACAGCCAATCCGAATGACATTGCTTATGTATTTTCTGGATATGCACCTCTTAGCATCCGTCTCATTCAACAAGCCATCAGATCAGGATGGCGTCCAATTGAAGAAATCCTGAAGCTACTACCTGGACCGCACTATGAAACAAAAAGAGGAGCACTTCCACGTGATTCATCATCTGAGTCACTCTCTGCGGGGGCTGCAAATGTTGACAAATCGGCTGTTGGAAGGCGCTCTTTGGTACTGGTTGTCTTCATTGGTGGAGTGACATTTGCTGAAATATCTGCCCTTCGGTTTCTGAGTTCTCAGGAGCTGATGGCATACGACATAATCGTTGCGACAACAAAAGTAGTCAATGGCCAGACTTTGCTAGATACTTTTGTGGAAAAGCTGCCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_57282.p1 GENE.R_Transcript_57282~~R_Transcript_57282.p1 ORF type:complete len:596 (+),score=117.01,Sec1|PF00995.19|1.9e-92 R_Transcript_57282:328-2115(+)
MAQIPNLDNAPINLASFREQSQKELITILKNIRGKKCLVIDPRLSGSLSLIVQTSVLKEHGVELRHLSAEPLETECSKVVYLVCAQLDLMRHISLHIHDSTTKGLQRECSVYFVPGRSVACEQLLKEEKVHDLLTIGEFPLYMVLLDEDVISFELDFAYKECLVDADTSSLWHIAKAIHKLELSFGMIPNVRAKGKASLRVAEILDRMQIEEPVSISDMMPEISTVILLDREVDMVTPMCSQLTYEGLLDEILHVNNGAVELDGSIMGVQQEGRKVKVPLNSSDKLFREIRDLNFEVVVQVLRQKATSMKQDYTDITKMNQSVSELKDFVKKLNSLPEMTRHINLAQHLSTFTSKPAFLGRLDMEHTIVESESYDICFEYIEEMIHKQEPLVSVLRLLVLLSVTNSGLPKKHYDYLRRELLHSYGFEHVATLNSLEKAGLFKKQELRSNWLTIKRALRLVVEDTDTANPNDIAYVFSGYAPLSIRLIQQAIRSGWRPIEEILKLLPGPHYETKRGALPRDSSSESLSAGAANVDKSAVGRRSLVLVVFIGGVTFAEISALRFLSSQELMAYDIIVATTKVVNGQTLLDTFVEKLP*

Click here to download the sequence:
Link to NCBI Protein BLAST