Transcript Information: R_Transcript_57451.p1


Annotated TAIR IDAT2G02160.1
Annotated Gene NameCCCH-type zinc finger family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:553407-555899 | Reverse length=669
E-Value1.4E-116
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 128.382620251305
Replicate 227.554126149539
Replicate 328.034653385103
Condition 2: 8 Hour
Replicate 123.271418562462
Replicate 226.617242727846
Replicate 327.738386202736
Condition 3: 24 Hour
Replicate 134.098190895839
Replicate 226.962997464084
Replicate 331.423232868186


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_57451.p1 GENE.R_Transcript_57451~~R_Transcript_57451.p1 ORF type:complete len:746 (+),score=221.26,zf-CCCH_3|PF15663.1|1.3e-11,zf-CCCH_3|PF15663.1|1.7,zf-CCCH_2|PF14608.2|0.037,zf-CCCH_2|PF14608.2|0.019,zf-CCCH_2|PF14608.2|4.1 R_Transcript_57451:294-2531(+)
ATGGCTACTGTCACTAAAGAGCCATCAGCTCCCCTTTCTTCGTCTTCTACAGCTCCTCCTGAGGATGAATCCTTGAAACGCAACACCGATTGTGTCTATTTTCTCGCTTCTCCTTTGACTTGCAAGAAGGGAAGTGAATGTGAGTATCGTCATAGTGAATATGCTCGGGTTAACCCCAGAGATTGTTGGTACTGGTTGAATGGGAATTGCTTGAATTCGAAATGCTCATTTCGGCATCCACCTCTGGATAGTTTGATGGGATCTCCAGCTGGAAACTTTGCTGCACCACCACTTCCTGTTCCACCTCCAGCTGTGGCTGTTACTTCGGCTCCTCAGAGTTCAGCTAAGCAAGCAGTCCCCTGCATTTTCTTTCAGAAGGGATATTGCTTAAAAGCTGACAGATGCCCTTTCATGCATGGCCCAAATCCTCCCAATGCCAAGATCCAGCAGGTTCCATCAACCGCTCCTGCCAATGAACCGCTTCCTTTCAAGAAATTTTTTGGTGGGGTCGAAAAGCCAAAAATGAACATTCAAGCAAATCCTCCCAAGTTTGCTGACGCTCCAGTTCAAGCAAATGCAACTCCTAATGTTGAGACAGCTATGCCAAGAGACAGAGCGTTTGCTGGAAGACGTGGTCCACCTCCTAGTTCTGTGATTGAAGAGCCTCCAAGACACAAGGAGACAACTGTGCCTCCTATTGACAATGGGAATTCGAGAAGCAGGACTGCACGTGCCAATCGTTCAAGCTCGTTAGATGACCAAAATTATCAGAATGGCCGAGATGCAGACGACTCATTGAGGGAATCCTCTCCTGGGTTTGATGTACTTGTGGATGATAAACTGAGAGACGAAGAGTATTTTCAACATGAAGAGCAATATGTGAGAATGAGATCTCATGAAGGAAGAAGTCTGAATGAGTTTGAAATGAGTCATCATGATGATTATAATTCAGTGGCTGATGTTGACCCTGAAGTTTATCATAGTCGTCATGGCTATGACTCATATGACCGCTTACAGGATAGGTATGCTTGGGAGCAGCGTAGAACATCATCGGATAGATCGCTTGGTGAACCAGCTCTTTATGAGAGGAGACGTTCATACAAGTCACAAAGTCCTGATTTTGTTCAGAATTCTGATCTGCGTAGCCGTTTATCGAAGCCAAGGAGGGTGAATGGTCTCAAATCAGTTGTTAATCCTGATTACAGTCGTGACAATGATGTTGATGACCGAGGCTACCGGGGCACTCGGAGGGATACACGTTCACCACCACATGAGAGCTCCCGTGGCAGTCGCCTTCAGGGTAGAATAAAGCTTCCAAGAAGATCTCCTCCACTGAGTGCCAGTAATTTGCATTCTGACAGGGAACATGAAAGGGGGAGGAACTGGGGGAGGTTGTCCCCAAGCAGACCACAAGTTTCTTCTCAGCAAGGAAGACTTCGAGATAGATTAAGTGGACGGATTCAAGATGATAACAATGATGGAAGAAGTTTTAGAGGTTCTGTGACGAGAAGAGACTCCAGTAAAGATAACGGTACCAACTTTGCTGGTCCGAAAAGTTTGGCTGAACTGAAAGGCACCAAACAGCCTGATACCAAGCAGCAGCAGCTGAAGAGTCAACAATCAGTTTCAGGGGGAAAGCTTAGAGACACAGTCTTAGCAAGTTCTGTAGGAACTGAAGGTGATCTTTCATTTGAAGGGCCCAAGCCCTTGAGTGAGATATTGAAGAGAAAAAGAGATTCAGGAAATGCAGCCTCTGGTGTATATTTTAGCAATAAAGAAGAGAGCAAGCAGAATGAAAATAAAGACCTGTCAGGCAGTGATGAAAACTCTGCTGGAGATGCAGAGAAACAAACTGGTCTTAGCTCAGCACCTGAGCAAGCACAGGCTGGTGAGAAAGAAAATAAGCCTGTGATGACAGCTGAGGGAGATGAAGAAGAGGAAATCTCGAATAAGAAGATGAAATTGTATGAAGGTGATTCTTCCATTCCCAACAGTAAGACAGAGCCCGATATGCAAGAGGCTTTGGATGCTGCCGAAGAAGGAGAACATGAAGCTGAACATGAACGTGAAAATGAAAATGAAGAAGAGTATGATCAGGGAGATGTGGACTATGAATATGAGCAAGATGATGGAGAGGGGTATAATCTAAATGATGTTGAAGCTGTTGACCATGAGGATGACTTCATGGAGGAGGAGGATGGAGATGATTTTGCAAAGAAGATTGGTGTTTCTTTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_57451.p1 GENE.R_Transcript_57451~~R_Transcript_57451.p1 ORF type:complete len:746 (+),score=221.26,zf-CCCH_3|PF15663.1|1.3e-11,zf-CCCH_3|PF15663.1|1.7,zf-CCCH_2|PF14608.2|0.037,zf-CCCH_2|PF14608.2|0.019,zf-CCCH_2|PF14608.2|4.1 R_Transcript_57451:294-2531(+)
MATVTKEPSAPLSSSSTAPPEDESLKRNTDCVYFLASPLTCKKGSECEYRHSEYARVNPRDCWYWLNGNCLNSKCSFRHPPLDSLMGSPAGNFAAPPLPVPPPAVAVTSAPQSSAKQAVPCIFFQKGYCLKADRCPFMHGPNPPNAKIQQVPSTAPANEPLPFKKFFGGVEKPKMNIQANPPKFADAPVQANATPNVETAMPRDRAFAGRRGPPPSSVIEEPPRHKETTVPPIDNGNSRSRTARANRSSSLDDQNYQNGRDADDSLRESSPGFDVLVDDKLRDEEYFQHEEQYVRMRSHEGRSLNEFEMSHHDDYNSVADVDPEVYHSRHGYDSYDRLQDRYAWEQRRTSSDRSLGEPALYERRRSYKSQSPDFVQNSDLRSRLSKPRRVNGLKSVVNPDYSRDNDVDDRGYRGTRRDTRSPPHESSRGSRLQGRIKLPRRSPPLSASNLHSDREHERGRNWGRLSPSRPQVSSQQGRLRDRLSGRIQDDNNDGRSFRGSVTRRDSSKDNGTNFAGPKSLAELKGTKQPDTKQQQLKSQQSVSGGKLRDTVLASSVGTEGDLSFEGPKPLSEILKRKRDSGNAASGVYFSNKEESKQNENKDLSGSDENSAGDAEKQTGLSSAPEQAQAGEKENKPVMTAEGDEEEEISNKKMKLYEGDSSIPNSKTEPDMQEALDAAEEGEHEAEHERENENEEEYDQGDVDYEYEQDDGEGYNLNDVEAVDHEDDFMEEEDGDDFAKKIGVSF*

Click here to download the sequence:
Link to NCBI Protein BLAST