Transcript Information: R_Transcript_57480.p1


Annotated TAIR IDAT1G20330.1
Annotated Gene Namesterol methyltransferase 2
Annotated Gene Symbol(s)SMT2, CVP1, FRL1
Annotation TypeOrtholog
Chromosome Positionchr1:7038968-7040053 | Reverse length=361
E-Value2.3E-230
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1190.61956454097
Replicate 2206.06618386411
Replicate 3207.62007040058
Condition 2: 8 Hour
Replicate 1183.40658952175
Replicate 2175.60415517939
Replicate 3178.70034389157
Condition 3: 24 Hour
Replicate 1221.62869304307
Replicate 2242.30237329648
Replicate 3173.46460695073


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_57480.p1 GENE.R_Transcript_57480~~R_Transcript_57480.p1 ORF type:complete len:361 (+),score=11.59,Sterol_MT_C|PF08498.6|1e-21,Methyltransf_11|PF08241.8|2.6e-21,Methyltransf_31|PF13847.2|2.8e-17,CMAS|PF02353.16|3.5e-14,Ubie_methyltran|PF01209.14|2.9e+03,Ubie_methyltran|PF01209.14|7.2e-11,Methyltransf_23|PF13489.2|4e-10,Methyltransf_12|PF08242.8|2.7e+03,Methyltransf_12|PF08242.8|1.1e-09,Methyltransf_25|PF13649.2|2.2e-09,Methyltransf_18|PF12847.3|4.8e-09 R_Transcript_57480:237-1319(+)
ATGGACTCGCTAGCTCTGTTCTGTACAGCGGGTCTCCTATGTGGGACCCTCTACTGGTTCGTATGCATTCTGGGCTCCGCGGAGCAGAAGGGTAAACGAGCTGTGGATCTTTCCGGCGGGTCAATTGCTTCCGAGAAGATCCAAGACAAGTATCGGCAGTACTGGTCTTTTTTCCGGCGACCTAAGGAGATCGAGAAAGCGGAGAATGTTCCAGACTTTGTGGACACTTTCTACAACCTGGTTACGGACATCTACGAGTGGGGGTGGGGGCAGTCTTTCCATTTCTCGCCTGCCATTCCCGGAAAGTCCCACCGCGAGGCCACGCGCCTCCACGAGGAGATGGCTGTGGATCTCATCGGGGGCCACTCCGGCCACAAGATCCTCGATGTCGGGTGCGGAGTGGGTGGCCCAATGCGGGCCATCGCTTCCCACTCTAGGGCCAATGTCGTCGGAATCACAATTAATGACTACCAGGTGAACAGAGCGCGTATGCACAACAAGAAGGCAGGGTTGGACAACCTGTGCGAGGTGGTATGCGGCAACTTCCTAGAGATGCCGTTCGAGGACAACTCATTCGACGGGGCATACTCGATTGAGGCCACCTGCCACGCGCCCAAGCTGGAGGACGTGTACAGAGAAATCTACCGAGTCATGAAGCCCGGCTCCCTGTACGTGTCTTACGAGTGGGTCACCACCGATAAGTACGACGGGAACAACGAGGAGCACAGAGACATCATTCAGGGGATCGAGCGTGGCGACGCGCTGCCGGGCATGAGGAGCTACGCAGACATTTCCAAGGCGGCGCGTGCGGTGGGGTTCGAGGTTGTCAAGGAAAAGGATCTGGCGGGGCCACCGTCTTTGCCGTGGTGGACCCGCCTCAAGATGGGGAGGATTGCATACTGGAGGAACCATATAGTGGTCACTGTTTTGGCTGCCCTAGGGATTGCTCCAAAAGGAACCGTTGATGTTCATGAGATGCTCTTCAAGACCGCTGATTTCCTTACACGTGGGGGTGATTCTGGCATCTTCTCTCCCATGCATATGATCCTCTGTAGAAAGCCACTGGATTCCAATTCCTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_57480.p1 GENE.R_Transcript_57480~~R_Transcript_57480.p1 ORF type:complete len:361 (+),score=11.59,Sterol_MT_C|PF08498.6|1e-21,Methyltransf_11|PF08241.8|2.6e-21,Methyltransf_31|PF13847.2|2.8e-17,CMAS|PF02353.16|3.5e-14,Ubie_methyltran|PF01209.14|2.9e+03,Ubie_methyltran|PF01209.14|7.2e-11,Methyltransf_23|PF13489.2|4e-10,Methyltransf_12|PF08242.8|2.7e+03,Methyltransf_12|PF08242.8|1.1e-09,Methyltransf_25|PF13649.2|2.2e-09,Methyltransf_18|PF12847.3|4.8e-09 R_Transcript_57480:237-1319(+)
MDSLALFCTAGLLCGTLYWFVCILGSAEQKGKRAVDLSGGSIASEKIQDKYRQYWSFFRRPKEIEKAENVPDFVDTFYNLVTDIYEWGWGQSFHFSPAIPGKSHREATRLHEEMAVDLIGGHSGHKILDVGCGVGGPMRAIASHSRANVVGITINDYQVNRARMHNKKAGLDNLCEVVCGNFLEMPFEDNSFDGAYSIEATCHAPKLEDVYREIYRVMKPGSLYVSYEWVTTDKYDGNNEEHRDIIQGIERGDALPGMRSYADISKAARAVGFEVVKEKDLAGPPSLPWWTRLKMGRIAYWRNHIVVTVLAALGIAPKGTVDVHEMLFKTADFLTRGGDSGIFSPMHMILCRKPLDSNSS*

Click here to download the sequence:
Link to NCBI Protein BLAST