Transcript Information: R_Transcript_57539.p1


Annotated TAIR IDAT5G27720.1
Annotated Gene NameSmall nuclear ribonucleoprotein family protein
Annotated Gene Symbol(s)emb1644
Annotation TypeOrtholog
Chromosome Positionchr5:9815904-9817304 | Forward length=129
E-Value7.3E-77
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1116.89396227851
Replicate 289.593802461327
Replicate 3108.10097399828
Condition 2: 8 Hour
Replicate 184.023413277876
Replicate 2101.23659518509
Replicate 3106.42314171953
Condition 3: 24 Hour
Replicate 1121.39333684786
Replicate 297.435904002893
Replicate 3102.99214465684


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_57539.p1 GENE.R_Transcript_57539~~R_Transcript_57539.p1 ORF type:complete len:146 (+),score=33.72,LSM|PF01423.18|5.9e-17 R_Transcript_57539:299-736(+)
ATGCTTCCTTTATCACTACTCAAGACTGCACAAGGCCACCCTATGTTGGTGGAATTGAAGAATGGGGAGACTTACAATGGACATTTGGTTAACTGTGATACTTGGATGAACATTCATCTTCGTGAAGTCATCTGTACCTCTAAGGATGGTGACAGGTTTTGGAGGATGCCCGAGTGTTATATTCGCGGTAACACAATTAAGTATCTGCGAGTGCCTGACGAGGTCATTGATAAAGTTCAGGAGGAGACCAAGAGCCGTTCAGATCGAAAGCCTCCTGGGGTTGGTCGTGGAAGAGGAAGAGGTAGAGAAGATGGTCCTGGGCGACAGCCAAAAGGCATAGGCCGTGGTATGGATGATGGAGCTAAAGTTGCTGGAGGCCGAGGCCGTGGTGGGTCTAGTGGGAAGCCTAGTGGTAAAGCTGGAGGTAGGGGTCGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_57539.p1 GENE.R_Transcript_57539~~R_Transcript_57539.p1 ORF type:complete len:146 (+),score=33.72,LSM|PF01423.18|5.9e-17 R_Transcript_57539:299-736(+)
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGPGRQPKGIGRGMDDGAKVAGGRGRGGSSGKPSGKAGGRGR*

Click here to download the sequence:
Link to NCBI Protein BLAST