Transcript Information: R_Transcript_57610.p1


Annotated TAIR IDAT3G57930.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G42190.1); Has 1519 Blast hits to 1241 proteins in 182 species: Archae - 0; Bacteria - 60; Metazoa - 576; Fungi - 133; Plants - 127; Viruses - 30; Other Eukaryotes - 593 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:21447250-21447675 | Reverse length=141
E-Value1.4E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 180.472908150731
Replicate 282.146109657925
Replicate 385.440459209007
Condition 2: 8 Hour
Replicate 165.593521428022
Replicate 282.914802739579
Replicate 380.291065955872
Condition 3: 24 Hour
Replicate 181.944290031732
Replicate 280.493645586049
Replicate 377.485669876972


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_57610.p1 GENE.R_Transcript_57610~~R_Transcript_57610.p1 ORF type:complete len:137 (+),score=35.73 R_Transcript_57610:668-1078(+)
ATGGGAAGAGGTAGGGGAAAGGGAAAGAAATTGACCGTGACCAGTCACGACGATGCAGGGAGTGGTGAAGAAGAAAAGATTCCTGCTCAAAAGAGAAGGGGGAGGCCTCAAAAGCCATTAAGAGACGATATTGATGACGAAGAGCTAGTGAAAACCGAAGAGGAGGATAGCGAGAATAAGAGTACAAGTGGGTTGAGCAAAGATTCGAGTATCATTACTACGGTAGAGAATGGTAAAAAGAGGAAACGGAACTCTCCAACAAAGGAGAAGTCGAGTCCTGTGAAGGAAGAAAATGGTGTTGGAGCGACATTAGTTGCAGAGGTTTCGACTAAGCCTAACGGGTTTCGACACATTGGGAGCAGGAGGAAAAACAAACCTCGTCGAGCAGCTGAGGTGGGTGTTGAGTGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_57610.p1 GENE.R_Transcript_57610~~R_Transcript_57610.p1 ORF type:complete len:137 (+),score=35.73 R_Transcript_57610:668-1078(+)
MGRGRGKGKKLTVTSHDDAGSGEEEKIPAQKRRGRPQKPLRDDIDDEELVKTEEEDSENKSTSGLSKDSSIITTVENGKKRKRNSPTKEKSSPVKEENGVGATLVAEVSTKPNGFRHIGSRRKNKPRRAAEVGVEC*

Click here to download the sequence:
Link to NCBI Protein BLAST