Transcript Information: R_Transcript_57654.p1


Annotated TAIR IDAT5G11600.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3733815-3735015 | Reverse length=242
E-Value6.5E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.7650357059788
Replicate 25.9246986323217
Replicate 37.5977793016941
Condition 2: 8 Hour
Replicate 12.3031259108795
Replicate 22.7674358714339
Replicate 37.727913432442
Condition 3: 24 Hour
Replicate 18.4102858160896
Replicate 27.8612803966414
Replicate 37.8015581062208


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_57654.p1 GENE.R_Transcript_57654~~R_Transcript_57654.p1 ORF type:internal len:202 (+),score=62.19 R_Transcript_57654:2-604(+)
AGAATGTGCTCCCAATTTTATTTTCACATATTAAGCTATATTCAAATTCCGAACCAAAAACAAGAAAGCGCAAAAACCCTTGGTTCGCCGTTTGAAACCTGTTATTGCAATCCCAATTCTCTCAATTGTTGGTCAGAAACAATGCCTCCAGAGAACCAAAAATCAGTGAAAAAGGAACAACAAGACTCGGAAGATGATGAGAAGCCAATTTCTCAGGTCCGAAATAAGAACAAGAAGAAGCCTTTAACTCCCACAAGTGGAGCTACAAAGCAACAATCTAAGGTTAAGAAAGAAGAATTGAATGATTCTGTGTCTCCTTTGAAGAAATCAAAACAAGCCAAACCCAAGAAAGAAGAGCCTGATTTTTGTGATGACAAGAAGCCCAATATCAAGGATGACAAGAAAAAGGCGAAGAAGGTTCAGGAAGAAGAGAAAGGGAAGGGTGATGGGAAGAAGAGAGAGAAAAAGGTGTATGATTTGCCTGGACAGAAACGTGACCCTCCTGAAGAGAGAGAACCATTAAGGATTTTCTATGAAAGTTTGTATGAGCAAAAGCCTGGCAGTGAATTGGCTGAAGTCTGGATGATGGAGAATGGTTTGCTA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_57654.p1 GENE.R_Transcript_57654~~R_Transcript_57654.p1 ORF type:internal len:202 (+),score=62.19 R_Transcript_57654:2-604(+)
RMCSQFYFHILSYIQIPNQKQESAKTLGSPFETCYCNPNSLNCWSETMPPENQKSVKKEQQDSEDDEKPISQVRNKNKKKPLTPTSGATKQQSKVKKEELNDSVSPLKKSKQAKPKKEEPDFCDDKKPNIKDDKKKAKKVQEEEKGKGDGKKREKKVYDLPGQKRDPPEEREPLRIFYESLYEQKPGSELAEVWMMENGLL

Click here to download the sequence:
Link to NCBI Protein BLAST