Transcript Information: R_Transcript_57707.p1


Annotated TAIR IDAT3G57930.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G42190.1); Has 1519 Blast hits to 1241 proteins in 182 species: Archae - 0; Bacteria - 60; Metazoa - 576; Fungi - 133; Plants - 127; Viruses - 30; Other Eukaryotes - 593 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:21447250-21447675 | Reverse length=141
E-Value4E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.3835644344681
Replicate 211.385317831373
Replicate 311.61468385157
Condition 2: 8 Hour
Replicate 110.173704449912
Replicate 29.9206729295401
Replicate 312.143683161526
Condition 3: 24 Hour
Replicate 112.448951806572
Replicate 214.599960110664
Replicate 313.872488886062


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_57707.p1 GENE.R_Transcript_57707~~R_Transcript_57707.p1 ORF type:complete len:142 (+),score=49.51 R_Transcript_57707:104-529(+)
ATGATGGGTAGAGGTAGAGGAAAAGGGAAGAAGCAAACTGCTGTTGCCACTTGGGATGATCTAGGGAGCGCGGAAGAAGAAAAGATTCTGGCATCAAAGAGGAGAGGAAGACCACAGAAACCATTGAAGGATGATGTTGAAGAAGATGGAGGGAATGATAAGCTAGAAAATGGTGGTGATGAGTTTAAGAGTTCAATCACGAGCAAAAATGGTGTAGATCAAATCTTTGCAGACAATGGGACAAAGAGGAGGAAGAGATCTTCTCAAGTTAAAGAGAATTCAGATCACATTAAGGAGGAGAATGGCTCTGAAGTCAAACCTAGCACTGAGGATTCTATTAAACCACCTGTAGGGTTTCGACAAAATGGAAGTAGGCGAAAAAACAAGCCTCGTCGAGCTGCTGAAGTTGGTGTGGAATGCAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_57707.p1 GENE.R_Transcript_57707~~R_Transcript_57707.p1 ORF type:complete len:142 (+),score=49.51 R_Transcript_57707:104-529(+)
MMGRGRGKGKKQTAVATWDDLGSAEEEKILASKRRGRPQKPLKDDVEEDGGNDKLENGGDEFKSSITSKNGVDQIFADNGTKRRKRSSQVKENSDHIKEENGSEVKPSTEDSIKPPVGFRQNGSRRKNKPRRAAEVGVECK*

Click here to download the sequence:
Link to NCBI Protein BLAST