Transcript Information: R_Transcript_57729.p1


Annotated TAIR IDAT3G56010.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 25 Blast hits to 25 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:20788758-20789656 | Forward length=201
E-Value6.2E-56
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.5403762265198
Replicate 27.3198111543058
Replicate 39.5619867947242
Condition 2: 8 Hour
Replicate 112.467573436441
Replicate 217.950249184438
Replicate 312.739433141831
Condition 3: 24 Hour
Replicate 16.0027294127483
Replicate 27.284305688631
Replicate 36.2249435348057


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_57729.p1 GENE.R_Transcript_57729~~R_Transcript_57729.p1 ORF type:complete len:218 (+),score=42.68 R_Transcript_57729:1197-1850(+)
ATGCATCCTCCATTGACATTACACAAGCACCCAATGTGTGCTGAATTGCAGGTTTCAAGATCTTGCATTGGTTCTTCTGTTATAAAAACTACCCATCTTTCATCCATCCCACCACTGCTAATCAACTCAAGCAGAACTGTGAAGCAACAAAGACGGCGCTCACATCTTTTGGTCGCAGAAAGTGACAGAATAATTACAGATGGTGACGACAATTCCAGCATTTTAGAATCAGTTGGAGTGTCACCTAACCCTGCTCAGTCAGAAGAAGTGAGTGTTTCCAAGGATTCAAGGCCTCCAGCCTCTGAGGCACAGTCAACTCCAAAAAAAGTGCCACTAACAGCAAGAGAGAGATTAAGGGCGGCTAGGGTTCTTAGCCGTTACTCAGACCCCAAGCCTGCTAAACCAGAAATGGGGCGCAGTGTATTGGATGCATTGGAAGAAAGCGATAAGGGGAAGAAGGGCCTCCCAGAAGCTCCTACAAACCTGTTTGATGACAGCAAGCGGGGATTGCCAAAGCCAGGCCTGACGTTCAACTTCCCTGGAGGTTTTGATTTGTTTGTCATCGCCTTCTCTTTTGTTTTTATCAGCACAGTTATGTTTGCAACTACTTACCTTGTCTGGAAAGTTGGCGCTATCCATTTCAACGAGTACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_57729.p1 GENE.R_Transcript_57729~~R_Transcript_57729.p1 ORF type:complete len:218 (+),score=42.68 R_Transcript_57729:1197-1850(+)
MHPPLTLHKHPMCAELQVSRSCIGSSVIKTTHLSSIPPLLINSSRTVKQQRRRSHLLVAESDRIITDGDDNSSILESVGVSPNPAQSEEVSVSKDSRPPASEAQSTPKKVPLTARERLRAARVLSRYSDPKPAKPEMGRSVLDALEESDKGKKGLPEAPTNLFDDSKRGLPKPGLTFNFPGGFDLFVIAFSFVFISTVMFATTYLVWKVGAIHFNEY*

Click here to download the sequence:
Link to NCBI Protein BLAST