Transcript Information: R_Transcript_57805.p1


Annotated TAIR IDAT1G64260.1
Annotated Gene NameMuDR family transposase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:23847756-23849915 | Forward length=719
E-Value2E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.2988617508411
Replicate 24.4340013301499
Replicate 35.7480260800283
Condition 2: 8 Hour
Replicate 16.752623625203
Replicate 28.9999077224151
Replicate 39.9890229873682
Condition 3: 24 Hour
Replicate 17.0441967518545
Replicate 26.0001263317223
Replicate 38.0209601026518


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_57805.p1 GENE.R_Transcript_57805~~R_Transcript_57805.p1 ORF type:5prime_partial len:805 (+),score=138.12,DBD_Tnp_Mut|PF03108.11|7e-24,MULE|PF10551.5|1.9e-18,PB1|PF00564.20|4.1e-07,PB1|PF00564.20|1.1,SWIM|PF04434.13|2e-08,Transposase_mut|PF00872.14|1.4e-05 R_Transcript_57805:3-2417(+)
GATCTGAGTTTGCAGGTATGTAGACAATACCAACCTTTCTACCTTCCACTTCCAAATAATCCCTTTTGCCCAAATTCCCATTTTTTGTCAGCCCATCTTCTCCTACTACTCAGAATATTCAAGGTCATGGCTGGGAAAAAAGTAATAGCAATATGTCAATGGGGAGGCGAGTTTAAAAAGGATAAAGATGGATTGATGACCTATAAAGGTGGAGATGCTCATGCTATAGATATTGATGATGAGATGAAGTTCAGTGCCTTCAAGATGGAGGTTGCTGAGATGTTCAATTGGACCACTCATACAATGTCTATGAAGTACTTCCTTCCTGGAAACAAGAAGACCCTCATTACGATTTCGAATGATAAGGACTTGACCCGAATGGTCAAGTTCCATGACAATTGCGCCACTGTTGATATTTATATCACTGTCAAAGAAGTTGTTCCCCCTGATGTCTCTAACATGCCTGCCAGTAGGTCTAGCAGAACTACGTTGTCTGAGGCGGTGATGCCAATCGATGCCCCTCTTGATGTGGTGGAGGATACTAACCATCCTGGTGATTTGCATTTTGTTACTCCACTTGATATTGCACATGCTGATGCCCAAATTGATTTATCGACTGAGATTGCTCCAATAACTCCACTCGGTAGCTCCAGTGATGAGAAACTTGTTAAAGCTGCTGAGCAATGGCAAAACTACATTACTGGTGTTGGCCAGAGATTCAATAGTGTGACAGAGTTTCGTGAGGTGCTCCGTAAATATGCTATTGCTAATCAGTTTGCATTTAAATATAAAAAGAATGATAGTCATCGCGTGACTGTTAAATGCAAAGCCGAAGGTTGTCCATGGAGAATCCATGCATCAAGGCTGTCAACCACTCAGCTAATATGTATCAAGAAGATGACACCAACCCATACGTGTGAAGGTGGTGTCCATGCCACGGGTTATCAAGCTACAAGGAGCTGGGTTGCAGGTATAATAAAGGAGAAGCTGAAAGTGTTCCCAAGTTACAAGCCCAAGGATATTGTCAACGACATTAAGCAGGAGTATGGAATTGAATTGAACTACTTCCAGGCTTGGCGTGGGAAAGAAATTGCAAAGGAGCAGTTGCAAGGTTCATACAAGGAGGCGTACAGTCAGCTACCAGTTTTCTGTGAGAAGATAATCGAATCAAATCCTGGCAGCCTAGCTACTTTCACGACCAAGGATGATTCTAGTTTTCATCGTCTTTTTGTCACATTCCATGCCTCGGTATATGGATTCAAGCATGGCTGTCGACCTCTGCTTTTTCTTGATAGTATAGCTCTGAAGTCAAAGTATCAAGGTACACTGCTAGCTGCTAATGCTGCAGACGGGGATGATGGTGTCTTTCCTGTTGCTTTTGCTGTGGTTGATGCAGAAACTGATGATAATTGGCGTTGGTTCTTACTTCAGTTAAAGTCTGCGTTGCAGACACCTGGCCCAATAACCTTTGTTGCTGATAGACTGAAGGGTTTGAAGGAGTCCATTGCTGAAATATTTGAGGAATCTTACCATGGTTACTGTCTAAGGTACCTTACAGAGAATCTTATCAAGGACATAAAAGGGCAGTTTTCTCATGAGGTGAAGCGTCTCTTGATTGAGGATTTCTATGCTGCTGCCTATGCACCTAGGCTTGAGGGTTTTCAGAAATATGTTGACAGCATCAAAAGTATCTCCATAGAAGCATACAACTGGGTCATGCATAGCGAACCTCAGCATTGGGCCGATGCTTTCTTTAGAGGTGCAAGGTATAATCACCTGGCATCAAATTTTGGAGAAATTTTTTATAGCTGGGCATCAGAGGCCCATGAGTTGCCCATAACGCAGATGGTCGATGTTATCCGAGCTAAGATAATGGAGTTAATATATGAACGACGTTCAAATTCAAACCAGTGGCCAGGGAGACTAACTCCATCCATGGAAGAAAAATTAGAGAAAGAAAGCTTGAAAGTCCGCTCTCTGCATGTTTTACTCTCGGCTGGCAGCACGTTTGAGGTACGTGGAGACACCATAGAAATAGTTGATATTGATCACTGGGACTGTAGCTGCAAAGGCTGGCAGCTCACTGGTCTGCCTTGCTGCCATGCGATAGCTGTCATTGGCTGCATTGGGAGGAGCCCCTATGAATATTGTTCCCGATACTTCACTGTTGAGATCTACAGGTTAACATACTCAGAGACACTACATCCCCTACCAAGCATTAGCCGGCCTACGCAGAACGATTCTTCTGTAGGTGCGGTAACAGTTACCCCTCCTCCCACACGTCGGCCACCAGGGCGGCCAACAAAGAAACGATTTGGTACTCAGGAGGTTGTCAAACGTCAGCTTCAGTGCAGTAGATGCAAATGCATGGGACACAATAAATCAACTTGCAAAGAGATTTTACCAGAGCAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_57805.p1 GENE.R_Transcript_57805~~R_Transcript_57805.p1 ORF type:5prime_partial len:805 (+),score=138.12,DBD_Tnp_Mut|PF03108.11|7e-24,MULE|PF10551.5|1.9e-18,PB1|PF00564.20|4.1e-07,PB1|PF00564.20|1.1,SWIM|PF04434.13|2e-08,Transposase_mut|PF00872.14|1.4e-05 R_Transcript_57805:3-2417(+)
DLSLQVCRQYQPFYLPLPNNPFCPNSHFLSAHLLLLLRIFKVMAGKKVIAICQWGGEFKKDKDGLMTYKGGDAHAIDIDDEMKFSAFKMEVAEMFNWTTHTMSMKYFLPGNKKTLITISNDKDLTRMVKFHDNCATVDIYITVKEVVPPDVSNMPASRSSRTTLSEAVMPIDAPLDVVEDTNHPGDLHFVTPLDIAHADAQIDLSTEIAPITPLGSSSDEKLVKAAEQWQNYITGVGQRFNSVTEFREVLRKYAIANQFAFKYKKNDSHRVTVKCKAEGCPWRIHASRLSTTQLICIKKMTPTHTCEGGVHATGYQATRSWVAGIIKEKLKVFPSYKPKDIVNDIKQEYGIELNYFQAWRGKEIAKEQLQGSYKEAYSQLPVFCEKIIESNPGSLATFTTKDDSSFHRLFVTFHASVYGFKHGCRPLLFLDSIALKSKYQGTLLAANAADGDDGVFPVAFAVVDAETDDNWRWFLLQLKSALQTPGPITFVADRLKGLKESIAEIFEESYHGYCLRYLTENLIKDIKGQFSHEVKRLLIEDFYAAAYAPRLEGFQKYVDSIKSISIEAYNWVMHSEPQHWADAFFRGARYNHLASNFGEIFYSWASEAHELPITQMVDVIRAKIMELIYERRSNSNQWPGRLTPSMEEKLEKESLKVRSLHVLLSAGSTFEVRGDTIEIVDIDHWDCSCKGWQLTGLPCCHAIAVIGCIGRSPYEYCSRYFTVEIYRLTYSETLHPLPSISRPTQNDSSVGAVTVTPPPTRRPPGRPTKKRFGTQEVVKRQLQCSRCKCMGHNKSTCKEILPEQ*

Click here to download the sequence:
Link to NCBI Protein BLAST