Transcript Information: R_Transcript_57880.p1


Annotated TAIR IDAT5G49760.1
Annotated Gene NameLeucine-rich repeat protein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20216679-20221052 | Forward length=953
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 123.826530354323
Replicate 215.400224544588
Replicate 317.210098760593
Condition 2: 8 Hour
Replicate 119.27009308545
Replicate 227.616744939219
Replicate 335.42706794745
Condition 3: 24 Hour
Replicate 116.573946875824
Replicate 213.908930318192
Replicate 316.651191918154


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_57880.p1 GENE.R_Transcript_57880~~R_Transcript_57880.p1 ORF type:complete len:953 (+),score=146.02,Pkinase_Tyr|PF07714.13|2.4e-44,Pkinase|PF00069.21|2.7e-44,LRR_8|PF13855.2|0.03,LRR_8|PF13855.2|1.6e-05,LRR_8|PF13855.2|41,LRR_8|PF13855.2|0.0026,LRR_8|PF13855.2|0.14,LRR_4|PF12799.3|5.4,LRR_4|PF12799.3|0.52,LRR_4|PF12799.3|0.0015,LRR_4|PF12799.3|0.29,LRR_4|PF12799.3|2.9 R_Transcript_57880:613-3471(+)
ATGCATCGGGAGAAGATGGGTCTGAAAGTTGTGTTATTTCTTGCATTCCTGTGCCTCTATGTTGCAGATGTTACAGCAAACACAAACAATAATGATTATGCGGCATTGACATCCCTAACCAGAGGGTGGAAGAACTTACCCCGGAGCTGGACTGGTGGAGATCCTTGTGGCAGCGGATGGGAAGGAATTACCTGTCGTAATTCTCGCATCATTTACATAACATTATCAAGTATGGGATTGACAGGCCAATTGAGTGGAGATTTGACGTCGTTGTCTGAACTGCAGATTCTGGATCTATCGTACAACAAAGGACTTACAGGTTCTCTCCCTCGTGATATTGGACAACTATCAAAGCTAACAAGCTTAATTATTCTTGGATGTAGTTTTTCCGGCACAATTCCTGATTCAGTGGGACAACTAGAGGAGCTTGTGTACCTATCTCTGAATACAAACAAATTTACAGGAGGAATACCAGCAACGATTGGTAACTTGAAAAAACTTTATTGGCTGGATCTCTCCGAGAATCAGCTGACTGGAACCATCCCTGTATCTGATGGAACGAAACCTGGGCTTGATTTACTAGTTAAAACAAAGCACTTTCACTTTGGAATGAATAAGCTGTCTGGCACAATACCACCCAGTCTTTTCCGCTCTGACATGGTTCTGATCCATGTGCTTTTCGACAACAATGATCTCACTGGAAGTCTCCCTTCAACTTTAGGTCTTGTGCAGTCTCTGGAGGCAATACGGTTTGATAGGAATTCGTTAAGCGGGGATCTTCCTGACAATCTCAACAATCTTACTAGTGCCAATGAGCTGATGCTGTCTAACAATAAGTTCACTGGTCCTGTGCCCGATCTTACAGGCATGAGCAACCTAAACTATGTGGACTTGAGCAACAACAGTTTTTCAGCTACAGATATTCCAGGATGGTTCTCGTCCTTGGACTCCCTGCAGACAGTGGTGATGGAACGTACAGGGCTTCAAGGAGAACTTCCAGTAAAATTCTTCAGCAGCCCTCAGTTACAGACAGTAATATTGAAGAGCAACAACATAAATGGCACTTTAGATATAGGCAGCAGTTATAGTAACGAATTGGAGCTCATTGATCTGCAGCATAATTCTATTGATCGCTTCACAGTGTCACCCACATTTAACTTTACATTGATGCTAGCCGATAACCCATTTTGTCAGACAACTGGGGCAAATTTACCTTATTGTAGTAACGAGCAAAAGACTCGTTCCTCATATACAACTCCAGTATTATGTGAGGCACCTCGTTGTAGCTCGGGACAAATTTCCAGCCCTAATTGCAAATGTGCATATCCATACACTGGAACCATGTTCTTCAGAGCTCCAACGTTCTCAGTATTTGGAGGCCAAGCTCATTTTGCAACACTTGGGAAGTCGCTTTTTCAAGAATTCGTGAAGCTGTCACTGCCGATGGATTCTGTAGCGCTGGGTAATGCAGCTCTGGATCAAAACGGTTATCTTAACATACGACTAGCAGTCTTTCCAGCTGGTCAATACTATTTCAATAGAACAGGAGTTTTCTCAATTGGGTTTGTGCTCAGCAACCAGACTTACAAACCACCAGACGAGTTTGGCCCCTATGTTTTTCTTGCTGACAACTACTCATGGTTTGCAGGAAAGCCGAGCTCCTCTAATAAAGGTATAGTTATTGGTGCTGCTGTAGGAGCCTCAGTTCTAGTCCTGTTGCTACTGTGTGCTGGAGGCTATGCATATCGTCAGAAGAAGAGAGCAGAGAAAGCGAAACAGAAGGCCGATCCATTTGTATCTTGGGACGCACAAGGAACTGGTGGTGACATTCCTCAGTTAAAAGGAGCCAGGTTTTTCTCATTTGACGAGTTGCAGAAATCTAGCAACAATTTTTCGGAGGCCAACACCATTGGAGCTGGAGGCTATGGAAAGGTGTACAAAGGAATTCTCCTTGATGGGCAAATTGTTGCTATAAAAAGATCTCAAGAAGGATCAATGCAGGGAAGTCGAGAGTTTAAAAATGAGATAGAACTTTTGTCAAGGGTTCATCACAAGAATCTCGTGAATCTCGTAGGTTTCTGCTTTGAACAGGGAGAACAGATGCTGGTTTATGAATTCATTCCAAATGGTACAGTTATGGACAGTCTTGCAGGGAAATCTGGAATTCGATTGGATTGGATAAGAAGACTTAAGGTGTCCCTTGGCTCAGCTCGGGGCTTGCAATATTTGCATGAGCTTGCTGATCCACCAATCATACACCGGGATATCAAATCTAACAACATCCTCCTTGATGAGCGTTTGAATGCTAAAGTTGCTGACTTCGGTCTCTCCAAACTTTTCGGTGACACCGAGAAGGGTTATATCACCACCCAAGTGAAAGGGACTATGGGATACCTCGATCCTGAATATTTCATGACAAATCAGTTGACGGAGAAAAGTGATGTATTTAGCTTTGGTGTCGTTATGCTGGAACTGGTCACGGCAAGAAGACAAATACATCAAGGAAAATACATAGTGAAAGAAATAAGGACAGCAATGGACAGGACAAAGGATTTGTATGGTCTCGATGAACTAATGGATCCGATCCTGCTTAACTATACAGCAATGCTGGTTGGTTTTGAGAAGTTTGTGGATTTGGCATTGAAGTGTGTCGATGAATCTGGAGCTAATAGGCCTATGATGGGGGAAGTAGTTAAAGAAATCGAGAGCATTGTGAAGCTTGCTGGTATGAACCCGAATGCTGAATCTACAACAAGCTCACAAAATTATGAGGGAAATTTACGCCATCCCTACAGTGATGATTCACTTTTCCAGTACAGTGGGAGCATCCCAACCTCAACTTCAAAGTCTGGGTCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_57880.p1 GENE.R_Transcript_57880~~R_Transcript_57880.p1 ORF type:complete len:953 (+),score=146.02,Pkinase_Tyr|PF07714.13|2.4e-44,Pkinase|PF00069.21|2.7e-44,LRR_8|PF13855.2|0.03,LRR_8|PF13855.2|1.6e-05,LRR_8|PF13855.2|41,LRR_8|PF13855.2|0.0026,LRR_8|PF13855.2|0.14,LRR_4|PF12799.3|5.4,LRR_4|PF12799.3|0.52,LRR_4|PF12799.3|0.0015,LRR_4|PF12799.3|0.29,LRR_4|PF12799.3|2.9 R_Transcript_57880:613-3471(+)
MHREKMGLKVVLFLAFLCLYVADVTANTNNNDYAALTSLTRGWKNLPRSWTGGDPCGSGWEGITCRNSRIIYITLSSMGLTGQLSGDLTSLSELQILDLSYNKGLTGSLPRDIGQLSKLTSLIILGCSFSGTIPDSVGQLEELVYLSLNTNKFTGGIPATIGNLKKLYWLDLSENQLTGTIPVSDGTKPGLDLLVKTKHFHFGMNKLSGTIPPSLFRSDMVLIHVLFDNNDLTGSLPSTLGLVQSLEAIRFDRNSLSGDLPDNLNNLTSANELMLSNNKFTGPVPDLTGMSNLNYVDLSNNSFSATDIPGWFSSLDSLQTVVMERTGLQGELPVKFFSSPQLQTVILKSNNINGTLDIGSSYSNELELIDLQHNSIDRFTVSPTFNFTLMLADNPFCQTTGANLPYCSNEQKTRSSYTTPVLCEAPRCSSGQISSPNCKCAYPYTGTMFFRAPTFSVFGGQAHFATLGKSLFQEFVKLSLPMDSVALGNAALDQNGYLNIRLAVFPAGQYYFNRTGVFSIGFVLSNQTYKPPDEFGPYVFLADNYSWFAGKPSSSNKGIVIGAAVGASVLVLLLLCAGGYAYRQKKRAEKAKQKADPFVSWDAQGTGGDIPQLKGARFFSFDELQKSSNNFSEANTIGAGGYGKVYKGILLDGQIVAIKRSQEGSMQGSREFKNEIELLSRVHHKNLVNLVGFCFEQGEQMLVYEFIPNGTVMDSLAGKSGIRLDWIRRLKVSLGSARGLQYLHELADPPIIHRDIKSNNILLDERLNAKVADFGLSKLFGDTEKGYITTQVKGTMGYLDPEYFMTNQLTEKSDVFSFGVVMLELVTARRQIHQGKYIVKEIRTAMDRTKDLYGLDELMDPILLNYTAMLVGFEKFVDLALKCVDESGANRPMMGEVVKEIESIVKLAGMNPNAESTTSSQNYEGNLRHPYSDDSLFQYSGSIPTSTSKSGS*

Click here to download the sequence:
Link to NCBI Protein BLAST