Transcript Information: R_Transcript_57920.p1


Annotated TAIR IDAT5G13890.1
Annotated Gene NameFamily of unknown function (DUF716)
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4479940-4480872 | Reverse length=310
E-Value2.7E-107
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 128.979538658628
Replicate 226.10903590728
Replicate 324.394188089409
Condition 2: 8 Hour
Replicate 128.222344338546
Replicate 227.152499378583
Replicate 327.345283532011
Condition 3: 24 Hour
Replicate 138.1636275993
Replicate 230.361784966249
Replicate 334.679220413006


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_57920.p1 GENE.R_Transcript_57920~~R_Transcript_57920.p1 ORF type:complete len:308 (+),score=18.59,DUF716|PF04819.8|9.2e+03,DUF716|PF04819.8|3.8e-26 R_Transcript_57920:235-1158(+)
ATGTCAGGAGCCCTAATCTACCAAATATTCACGTCAACGGGCCTATTTTCCTACGGTCTATACCACCTAATCTCCGCCACACGCAACCACCTGAAATCCCCGACCACCACCTACACCGCCAAACCCTACCACCCATTGCCACTCCTCCACCACCGTCTCCGCCACCTCCCTCTCTACCTCCTCCTCCTCTCCTTCTCTCTCTCTTTCCTATCCCTTTCTCTCTCCTCTCTCTCTCCTGACCCTCTCCTCAAATTCCAACTCCACCACTTCACCTCTCTCCAATCCTCCTTCATCTCCCTCCTCTTCCTCCTTCTCTCTATTCTCCTCCTCCTTTCCGAATCTACCTCGTTTTTCTCTCTCCTCCCCTCCGACCTCCTCTTCGCCGCCTTCTCCTCCGCCTTCTTCCTCCACTCCTCCACCGCCTCCTCCCGCGCCTCCCTCGTCGCCCCCTCCTCCGCTCTCGAGGCCCACTGCGACTCCGTCTCGTCCCGCCTCTCCGCTGTCTGCTCCCTCCTCTGCCTCCTCCTCGCCGCCTTCCCGCGCCTCTTTGTCGCTGACGTCGCCCTCGCCGCTGTTGTTTGTCTCCACGGGCTTTGGGCCCTCCAGACCGGGCTGTCCCTTCACGTCGAGGGGTTCATCCCCGAGGGGTGTCATCGGTTGCTTGATGTTGTTAGCGGTGTTGAGGGTTCCACCAAATGCGAGCTCGAGGAGTCCCGGCTTCGAGCCGTTGCTATCCTCGATCTCGCCTTCGTCGTCCATGTATTGGTCGTTGTGGTCCTTGTGTTGGTTGTTTATGGTGTGGTTGTGAAGGTTGTGGGTGTTTCCAGAAGGTTTGGGGCGTACGAGTCGTTGCCTAATACGGATGCTGCTGCTGCTCCTACTAATCATGTCCAGTTGAAGACTTTGAGTGGGACTCGGGCGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_57920.p1 GENE.R_Transcript_57920~~R_Transcript_57920.p1 ORF type:complete len:308 (+),score=18.59,DUF716|PF04819.8|9.2e+03,DUF716|PF04819.8|3.8e-26 R_Transcript_57920:235-1158(+)
MSGALIYQIFTSTGLFSYGLYHLISATRNHLKSPTTTYTAKPYHPLPLLHHRLRHLPLYLLLLSFSLSFLSLSLSSLSPDPLLKFQLHHFTSLQSSFISLLFLLLSILLLLSESTSFFSLLPSDLLFAAFSSAFFLHSSTASSRASLVAPSSALEAHCDSVSSRLSAVCSLLCLLLAAFPRLFVADVALAAVVCLHGLWALQTGLSLHVEGFIPEGCHRLLDVVSGVEGSTKCELEESRLRAVAILDLAFVVHVLVVVVLVLVVYGVVVKVVGVSRRFGAYESLPNTDAAAAPTNHVQLKTLSGTRA*

Click here to download the sequence:
Link to NCBI Protein BLAST