Transcript Information: R_Transcript_57972.p1


Annotated TAIR IDAT4G31980.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158), Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT5G11290.1); Has 1967 Blast hits to 1844 proteins in 183 species: Archae - 0; Bacteria - 6; Metazoa - 223; Fungi - 83; Plants - 1477; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:15464905-15469204 | Forward length=680
E-Value8E-80
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.108366609496
Replicate 29.5350171615299
Replicate 312.451598188734
Condition 2: 8 Hour
Replicate 112.80453488067
Replicate 216.00136498727
Replicate 324.063373712348
Condition 3: 24 Hour
Replicate 116.902422293791
Replicate 215.42856413217
Replicate 316.767186617944


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_57972.p1 GENE.R_Transcript_57972~~R_Transcript_57972.p1 ORF type:complete len:436 (+),score=51.25,DUF247|PF03140.11|5.4e-105 R_Transcript_57972:405-1712(+)
ATGAGCTTCACCCCTTTTAAAAAGAGAAAAATAGAAAAAACTGTGAGAATGGGAGATTGGATTCATGGATTGGCATACTCCATGAGGAAGAGATTCGAGGATTTGCCTCCTCTCTCTTCCAAATGTTGCATATACAAGGTCCCTCGAACCCTACGAGAAGCCAATTTAAGTGCATATGAGCCTTCCCTTATTTCGATTGGACCACTCCATTATGGAATGGAGAGGTTGCAAGGTATGCAAGAGCATAAATTAAGATATGTCCAAGGTTTTCTTAAAAGGAATGAGGAAAAAACCATCAAGGATTACCTTAGAGCCATTAGGGGGTGGGAGAAGGAGGCAAGGGAGCACTACATTGATCCAATCGACCTAAGTAGTAATGAGTTTGCGGAGATGGTTTTCCTCGATGCGTGTTTTGTTATAGAGTTTTTCATGAATTGTCATTGGGACATTGTGGATGAGAATGATCGTATTTTTGGGAAACCTTCTTTGGAGTATGTGATTATACGGGATTTGTTGTTGATAGAGAACCAACTTCCATTCTTCGTTTTGGAAGGTTTGTATGATCTCGTGTTTGATAATGAGTCGTGTGCAAGGTTTCTCCCTTTCGTTGATCTCACCTATGAGGTTTTAGTGGGAAGAGGAGAGCTCCCAATGAAGTTAAAGCAGTGTGAGATATTGCATTTTGTGGATTTCTATAGAACTTATTACCTTCCTTCACAGCTACGGGACCCAAAATGCTTCAAATCTGGTGATGCAAGTTGGAACTTCTGTCCTGGTATAGGGGATCTTCATGACGCAGGGGTGAAATTTGTAATAAGCGACAGTGATTCGTTGCTCGACATAAGATTTGAGGATGGTGTCTTGCATATTCCGAGATTGTCAGTAGAGGATGATACAGAGTGCCTCTTCCTAAACTTATCGGCTTTTGAGCAGTGTCATTACCATTTTGATTCGTACATTGTGGATTACATCCTCTTTATGGATGTCCTGATAACTACACTAAAGGATGTGGATCTTCTTATCTGTAGTGGGATTGTAAAAAATGCCCTAGGTAACAATGAAGATGTGGCTCGCATTTTCAACACAATATGCAGGGAAACAACCTATGATGCTAGCAACTTTTATTATGCTGATACATGTAGGCGCTTAATTGGTCACTCAGAAAAGCCCTGCAACAGGTGGAAGGCGACTCTAAAACATGATTATTTTAGCAATCCATGGACAATGATTTCAGTTTTTGCAGCTGTATTTTTGCTCATTATTACTGTTCTACAAACATATTGTAGCATTGCTTCATTGAAAAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_57972.p1 GENE.R_Transcript_57972~~R_Transcript_57972.p1 ORF type:complete len:436 (+),score=51.25,DUF247|PF03140.11|5.4e-105 R_Transcript_57972:405-1712(+)
MSFTPFKKRKIEKTVRMGDWIHGLAYSMRKRFEDLPPLSSKCCIYKVPRTLREANLSAYEPSLISIGPLHYGMERLQGMQEHKLRYVQGFLKRNEEKTIKDYLRAIRGWEKEAREHYIDPIDLSSNEFAEMVFLDACFVIEFFMNCHWDIVDENDRIFGKPSLEYVIIRDLLLIENQLPFFVLEGLYDLVFDNESCARFLPFVDLTYEVLVGRGELPMKLKQCEILHFVDFYRTYYLPSQLRDPKCFKSGDASWNFCPGIGDLHDAGVKFVISDSDSLLDIRFEDGVLHIPRLSVEDDTECLFLNLSAFEQCHYHFDSYIVDYILFMDVLITTLKDVDLLICSGIVKNALGNNEDVARIFNTICRETTYDASNFYYADTCRRLIGHSEKPCNRWKATLKHDYFSNPWTMISVFAAVFLLIITVLQTYCSIASLKS*

Click here to download the sequence:
Link to NCBI Protein BLAST