Transcript Information: R_Transcript_57976.p1


Annotated TAIR IDAT1G54690.1
Annotated Gene Namegamma histone variant H2AX
Annotated Gene Symbol(s)HTA3, H2AXB, G-H2AX, GAMMA-H2AX
Annotation TypeOrtholog
Chromosome Positionchr1:20414607-20415206 | Reverse length=142
E-Value6.2E-85
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1430.87271211421
Replicate 2483.65421592754
Replicate 3430.06593261509
Condition 2: 8 Hour
Replicate 1286.7605169526
Replicate 2346.75113953726
Replicate 3404.70421988835
Condition 3: 24 Hour
Replicate 1571.03503611444
Replicate 2572.03886263378
Replicate 3612.08503740612


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_57976.p1 GENE.R_Transcript_57976~~R_Transcript_57976.p1 ORF type:complete len:142 (+),score=27.33,Histone_H2A_C|PF16211.1|7.2e-17,Histone|PF00125.20|7.8e-15 R_Transcript_57976:98-523(+)
ATGAGCAGCAAGGAAGGCGCATCTACCAAGGGCGGAAGAGGAAAGCCAAAGGCCTCGAAATCGGTGTCTCGCTCTCAAAAAGCCGGTCTTCAGTTTCCGGTCGGCCGTATCGCTCGTTTCTTGAAAGCCGGAAAGTACGCCGAGCGTGTCGGTGCCGGTGCTCCTGTTTACCTTTCTGCTGTTCTTGAGTATCTCGCCGCTGAGGTATTGGAATTGGCTGGAAATGCAGCAAGGGACAACAAGAAGAACAGAATAGTTCCTCGTCACATTCAATTGGCAGTAAGGAACGATGAGGAACTGAGCAAGCTACTTGGATCAGTGACCATTGCAAACGGTGGTGTTTTGCCAAACATTCATCAGACTCTTTTGCCACCAAGGAAGGGCGGTGCTAAGGGAGATATCAACTCTGCTTCTCAGGAGTTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_57976.p1 GENE.R_Transcript_57976~~R_Transcript_57976.p1 ORF type:complete len:142 (+),score=27.33,Histone_H2A_C|PF16211.1|7.2e-17,Histone|PF00125.20|7.8e-15 R_Transcript_57976:98-523(+)
MSSKEGASTKGGRGKPKASKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPPRKGGAKGDINSASQEF*

Click here to download the sequence:
Link to NCBI Protein BLAST