Transcript Information: R_Transcript_57990.p1


Annotated TAIR IDAT4G06634.1
Annotated Gene Namezinc finger (C2H2 type) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:3764499-3766439 | Reverse length=387
E-Value1.4E-197
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.614582735184
Replicate 223.360495101243
Replicate 321.617082128273
Condition 2: 8 Hour
Replicate 120.021953911286
Replicate 227.456525156201
Replicate 330.122914139463
Condition 3: 24 Hour
Replicate 125.358221388241
Replicate 225.129986671569
Replicate 324.05887110356


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_57990.p1 GENE.R_Transcript_57990~~R_Transcript_57990.p1 ORF type:complete len:373 (+),score=86.82,zf-C2H2|PF00096.22|0.037,zf-C2H2|PF00096.22|0.28,zf-C2H2|PF00096.22|0.00086,zf-C2H2|PF00096.22|0.0086,zf-C2H2|PF00096.22|0.0021,zf-C2H2_4|PF13894.2|0.31,zf-C2H2_4|PF13894.2|0.036,zf-C2H2_4|PF13894.2|0.0052,zf-C2H2_4|PF13894.2|0.00065,zf-C2H2_4|PF13894.2|0.054,zf-H2C2_2|PF13465.2|5.7e+02,zf-H2C2_2|PF13465.2|14,zf-H2C2_2|PF13465.2|0.0002,zf-H2C2_2|PF13465.2|0.00011,zf-H2C2_2|PF13465.2|1.3e+02,zf-H2C2_2|PF13465.2|1.1,zf-H2C2_2|PF13465.2|1.3e+03,zf-C2H2_aberr|PF17017.1|2.4,zf-C2H2_aberr|PF17017.1|46,zf-C2H2_aberr|PF17017.1|1.1,zf-C2H2_aberr|PF17017.1|1,zf-C2H2_aberr|PF17017.1|0.99 R_Transcript_57990:256-1374(+)
ATGGAGACTCAGATGACGCACAATTTTTTCGATAGACGACCAATTGTCAAATCCAAAACTCCCGCTGTCAAATGGGTCCGAGAATGGGTTCCTCAAGATGTTGTGGCAACTGGAGGGAAATGCCATCTTTTGAAATGGATCACAGAGGATGCCCTGAAGGCCTTGAAAGAGAAGACAAAGGAGCCAGAGGTCCCAGAGCCAGAGCCTGAACCAACAACAGAGGTACTTTTCCTCTGCAGCTATGAAGGTTGTGGGAAGACTTTCATTGATGCTGGTGCTCTGAGGAAACATTCTCACATCCACGGAGAGAGGCAACATATTTGTCACTATGAGGGCTGTGGAAAGAAATTTTTGGACAGTTCAAAGCTAAAGAGGCACTTTCTTATCCATACTGGCGAGAGAGACTTTATATGTCCCCATGAAGGGTGTGGTAAGGCTTTCTCCTTGGATTTCAATTTGAGATCCCATATGAAAACACATTCCCAGGAAAATTATCACATCTGCCCATACGAAGACTGTGGAAAGAGATATGCACACGAGTATAAGCTTAAAAATCATATTGCGTCTCACCATGAAAAGAATTCTGCTGAACCAACAAAATACACCCCACCTGCAGAGAAGCCTGTGAAAACTCCCAAGTCTACTACCGGGGCTTACGGCTCTGCATCCTCTGATAGGCCTTACACCTGCCCTTATGAAGGATGTGACAAGGCATACATCCACGAGTACAAGTTGAATCTTCATCTGAGGAGAGAGCATCCTGGTCATTATGCTGAAGAAAATGCTAAGCCAGTGCAACCTAATAACGTTGAAAATGAGTTGGACGAAGCCAGCGACCAGGATGCATTTGCAAAACGCTCAAATGCAAAGACTTTGAAGCAGAGTAAGCCAAAGCCAAATTTGAAACTACCACCTGCAAAGATTTCTCAGCGTAAAGGGTCCGGTGTTTCTCCAGCCAATTTGAACGTGGTTAAAAAACCATGGCCGGTTAGAGAAGACAATGTATATGAGGAAGAAGATAGTGAAGAAACAGAAGAGGACCGTGACAATGGTGAGGATGGGTGGAGGTACGGTGAAAATAATGATGAGGATGATGAGGAGACTGAGTATGAGGATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_57990.p1 GENE.R_Transcript_57990~~R_Transcript_57990.p1 ORF type:complete len:373 (+),score=86.82,zf-C2H2|PF00096.22|0.037,zf-C2H2|PF00096.22|0.28,zf-C2H2|PF00096.22|0.00086,zf-C2H2|PF00096.22|0.0086,zf-C2H2|PF00096.22|0.0021,zf-C2H2_4|PF13894.2|0.31,zf-C2H2_4|PF13894.2|0.036,zf-C2H2_4|PF13894.2|0.0052,zf-C2H2_4|PF13894.2|0.00065,zf-C2H2_4|PF13894.2|0.054,zf-H2C2_2|PF13465.2|5.7e+02,zf-H2C2_2|PF13465.2|14,zf-H2C2_2|PF13465.2|0.0002,zf-H2C2_2|PF13465.2|0.00011,zf-H2C2_2|PF13465.2|1.3e+02,zf-H2C2_2|PF13465.2|1.1,zf-H2C2_2|PF13465.2|1.3e+03,zf-C2H2_aberr|PF17017.1|2.4,zf-C2H2_aberr|PF17017.1|46,zf-C2H2_aberr|PF17017.1|1.1,zf-C2H2_aberr|PF17017.1|1,zf-C2H2_aberr|PF17017.1|0.99 R_Transcript_57990:256-1374(+)
METQMTHNFFDRRPIVKSKTPAVKWVREWVPQDVVATGGKCHLLKWITEDALKALKEKTKEPEVPEPEPEPTTEVLFLCSYEGCGKTFIDAGALRKHSHIHGERQHICHYEGCGKKFLDSSKLKRHFLIHTGERDFICPHEGCGKAFSLDFNLRSHMKTHSQENYHICPYEDCGKRYAHEYKLKNHIASHHEKNSAEPTKYTPPAEKPVKTPKSTTGAYGSASSDRPYTCPYEGCDKAYIHEYKLNLHLRREHPGHYAEENAKPVQPNNVENELDEASDQDAFAKRSNAKTLKQSKPKPNLKLPPAKISQRKGSGVSPANLNVVKKPWPVREDNVYEEEDSEETEEDRDNGEDGWRYGENNDEDDEETEYED*

Click here to download the sequence:
Link to NCBI Protein BLAST