Transcript Information: R_Transcript_58027.p1


Annotated TAIR IDAT2G39960.1
Annotated Gene NameMicrosomal signal peptidase 25 kDa subunit (SPC25)
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:16681666-16683491 | Reverse length=192
E-Value1.3E-103
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1114.10489727714
Replicate 2122.02038461828
Replicate 3111.41549333417
Condition 2: 8 Hour
Replicate 192.046340482314
Replicate 296.467888152549
Replicate 3119.45850549647
Condition 3: 24 Hour
Replicate 1121.39992303655
Replicate 2119.97598946236
Replicate 3135.10787343378


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_58027.p1 GENE.R_Transcript_58027~~R_Transcript_58027.p1 ORF type:complete len:191 (+),score=18.31,SPC25|PF06703.7|1.6e-39 R_Transcript_58027:144-716(+)
ATGGCGAACGATTCGAACAGTGGTGAGAAGAAAAACCCTAAGAAGGCAAATTTGTTGGATCATCACTCCATCAAACACATCCTCGATGAGTCTGCTACTGAGGTTGTTAAAAGTCGTGGGTATCCGGAAGATGTGAGATTGAGCAATATAAGATTGTTTATGGGCACCATTATCATTATCATTGCTCTTGTAGCTCAATTTTACCCTAAGAAGTTCCCTGAGAACCGGGACTTTTTGATCGGCTGCATTGTATTATATATCGTCTTCAATTGTTTGTTGCAGCTGATTACCTACACGAAGGAAAAGAATGCCATCATGTTTACCTATCCCCCACCGGGATCTTTCACTACAGGCCTTGTTGTATCTTCTAAATTACCAAGGTTCTCTGATATGTATACGCTGACGATAGAAAGTGCCGACCCAAAGTCAATCTCCGCCAACAAGCCTGTGGAGTTGACCAAGAGTGTAACTAAATGGTTCACTAAGGATGGAGTTCTGGTAGAAGGACTCTTCTGGAAAGATGTCGAGGGACTAATAGATGAATATAACAAGGAACCTAAGAAGAATAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_58027.p1 GENE.R_Transcript_58027~~R_Transcript_58027.p1 ORF type:complete len:191 (+),score=18.31,SPC25|PF06703.7|1.6e-39 R_Transcript_58027:144-716(+)
MANDSNSGEKKNPKKANLLDHHSIKHILDESATEVVKSRGYPEDVRLSNIRLFMGTIIIIIALVAQFYPKKFPENRDFLIGCIVLYIVFNCLLQLITYTKEKNAIMFTYPPPGSFTTGLVVSSKLPRFSDMYTLTIESADPKSISANKPVELTKSVTKWFTKDGVLVEGLFWKDVEGLIDEYNKEPKKNK*

Click here to download the sequence:
Link to NCBI Protein BLAST