Transcript Information: R_Transcript_58079.p2


Annotated TAIR IDAT3G07590.1
Annotated Gene NameSmall nuclear ribonucleoprotein family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:2423146-2423958 | Forward length=114
E-Value7.5E-71
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 156.898885182985
Replicate 265.740140613788
Replicate 359.873472751323
Condition 2: 8 Hour
Replicate 154.544375020415
Replicate 252.58662557134
Replicate 349.948225086444
Condition 3: 24 Hour
Replicate 166.023486992777
Replicate 265.861566204276
Replicate 368.078309060626


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_58079.p2 GENE.R_Transcript_58079~~R_Transcript_58079.p2 ORF type:5prime_partial len:145 (+),score=22.68,LSM|PF01423.18|1.3e-17 R_Transcript_58079:2-436(+)
GCTCAGCTATTTTACTTATTTTCGCTTTCTCCCTACTCTTCAGGCTCGAAAGCCCTAGACACCACTCTCTCTCTCATCGCAACGAAAATGAAGCTCGTACGGTTTTTGATGAAATTGAACAACGAGACTGTCTCCATTGAGCTCAAGAATGGCACTGTTGTTCACGGAACTATTACAGGTGTTGATATTAGCATGAACACACACTTGAAGACAGTCAAACTCACACCAAAAGGAAAAAATCCTGTAACTATGGATCACTTGAGCGTGCGTGGGAACAATATTCGATACTACATTCTTCCTGACAGCTTGAATCTTGAAACCTTGCTTGTGGAGGAGACACCGAGGGTCAAACCAAAGAAGGCAGCTGCTGGAAGACCTGCTGTGGGACGTGGAAGAGGTCGGGGCCGTGGGCGTGGACGTGCTCGTGGTCGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_58079.p2 GENE.R_Transcript_58079~~R_Transcript_58079.p2 ORF type:5prime_partial len:145 (+),score=22.68,LSM|PF01423.18|1.3e-17 R_Transcript_58079:2-436(+)
AQLFYLFSLSPYSSGSKALDTTLSLIATKMKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTPKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKAAAGRPAVGRGRGRGRGRGRARGR*

Click here to download the sequence:
Link to NCBI Protein BLAST